Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30i06
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   238   3e-63
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  238 bits (582), Expect = 3e-63
 Identities = 118/229 (51%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
 Frame = +2

Query: 71  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 244
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 245 TRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 424
           TR PR+V+V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 425 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVIS 604
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187

Query: 605 DTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICF 751
            TG VIG+ RKNHIPRVGDFNES YYME   GHPVF T+YG+I +NIC+
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICY 236


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
 Frame = +2

Query: 326 KKAIFNKVKKIIDVAGQEGVNIICFQEL-------WN-MPFAFCTREKQPWCEFA---ES 472
           K A   KVKK ++ A   G  ++ F E        WN       TR  +   EF    E+
Sbjct: 16  KPATLEKVKKNVEEAAGNGAELVLFPEAFIGGYPKWNSFGITMGTRTPEGRKEFKRYFEN 75

Query: 473 A--EDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHI 646
           A  E+G  +  +  LA +  + IV  ++ER+   +  L+ +    S +G  +GKHRK  +
Sbjct: 76  AIEENGEESKLIESLAAQNNIHIVIGVVERE---ASTLYCSVFFYSPSG-YLGKHRKL-L 130

Query: 647 PRVGDFNESNYYMEGN-TGHPVFATRYGKIAVNICF 751
           P      E   + +G+ +  PVF+T  GKI   IC+
Sbjct: 131 PTA---LERCVWGQGDGSTMPVFSTSVGKIGSAICW 163


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 633 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 487
           +C P+TF ++   T +       F+++  IE+T I IA L+  +   V++
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 507 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 361
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical
           protein F13B6.1 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1

Query: 682 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 590
           V+ GFV + DS+++V     D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 329 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 463
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 329 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 463
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 581 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 685
           WN  + + D   ++   +  H+ R GD+   NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 356 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 511
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 356 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 511
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,865,491
Number of Sequences: 27780
Number of extensions: 390875
Number of successful extensions: 1235
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)