Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30i05
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 65 2e-10
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 65 2e-10
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 64 4e-10
BC053660-1|AAH53660.1| 783|Homo sapiens polyribonucleotide nucl... 36 0.16
AY027528-1|AAK13047.1| 783|Homo sapiens 3'-5' RNA exonuclease p... 36 0.16
AK027437-1|BAB55109.1| 504|Homo sapiens protein ( Homo sapiens ... 36 0.16
AJ458465-1|CAD30289.1| 783|Homo sapiens polynucleotide phosphor... 36 0.16
AC015982-3|AAY24271.1| 783|Homo sapiens unknown protein. 36 0.16
D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein. 35 0.28
BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7 pro... 35 0.28
BC117219-1|AAI17220.1| 527|Homo sapiens ZNF569 protein protein. 31 3.4
AY835704-1|AAV97944.1| 686|Homo sapiens ZNF569 protein. 31 3.4
DQ778127-1|ABH10109.1| 299|Homo sapiens BORIS transcription fac... 30 7.8
DQ778126-1|ABH10108.1| 422|Homo sapiens BORIS transcription fac... 30 7.8
DQ778125-1|ABH10107.1| 460|Homo sapiens BORIS transcription fac... 30 7.8
DQ778124-1|ABH10106.1| 403|Homo sapiens BORIS transcription fac... 30 7.8
DQ778123-1|ABH10105.1| 573|Homo sapiens BORIS transcription fac... 30 7.8
DQ778122-1|ABH10104.1| 627|Homo sapiens BORIS transcription fac... 30 7.8
DQ778115-1|ABH10097.1| 665|Homo sapiens BORIS transcription fac... 30 7.8
DQ778112-1|ABH10094.1| 613|Homo sapiens BORIS transcription fac... 30 7.8
DQ778111-1|ABH10093.1| 700|Homo sapiens BORIS transcription fac... 30 7.8
DQ778110-1|ABH10092.1| 663|Homo sapiens BORIS transcription fac... 30 7.8
DQ778109-1|ABH10091.1| 663|Homo sapiens BORIS transcription fac... 30 7.8
DQ778108-1|ABH10090.1| 663|Homo sapiens BORIS transcription fac... 30 7.8
DQ294738-1|ABB92839.1| 613|Homo sapiens BORIS-like protein prot... 30 7.8
BC130486-1|AAI30487.1| 663|Homo sapiens CCCTC-binding factor (z... 30 7.8
AY071919-1|AAL61541.1| 662|Homo sapiens zinc finger protein CTC... 30 7.8
AL160176-2|CAI42956.1| 663|Homo sapiens CCCTC-binding factor (z... 30 7.8
AF336042-1|AAM28645.1| 663|Homo sapiens nuclear DNA binding fac... 30 7.8
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +1
Query: 133 MSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVC 312
M+ +K + P++++ ++ R DGR E R +N+ SI TAD SA+VK GNTTV+C
Sbjct: 1 MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC 60
Query: 313 GIK 321
G+K
Sbjct: 61 GVK 63
Score = 56.0 bits (129), Expect = 1e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 618 ELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVS 755
E A P + PD G+++ NV+LP LCSS++R GPP + AQV + ++
Sbjct: 65 EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIA 110
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +1
Query: 133 MSEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVC 312
M+ +K + P++++ ++ R DGR E R +N+ SI TAD SA+VK GNTTV+C
Sbjct: 1 MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC 60
Query: 313 GIK 321
G+K
Sbjct: 61 GVK 63
Score = 56.0 bits (129), Expect = 1e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 618 ELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVS 755
E A P + PD G+++ NV+LP LCSS++R GPP + AQV + ++
Sbjct: 65 EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIA 110
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 64.5 bits (150), Expect = 4e-10
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 145 YKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIK 321
+K + P++++ ++ R DGR E R +N+ SI TAD SA+VK GNTTV+CG+K
Sbjct: 3 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVK 61
Score = 56.0 bits (129), Expect = 1e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 618 ELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVS 755
E A P + PD G+++ NV+LP LCSS++R GPP + AQV + ++
Sbjct: 63 EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIA 108
>BC053660-1|AAH53660.1| 783|Homo sapiens polyribonucleotide
nucleotidyltransferase 1 protein.
Length = 783
Score = 35.9 bits (79), Expect = 0.16
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIKLIALNIFLFKVEVIIA 369
R DGR+ RN+ V+ KT SA+ + G T V+C + +L + +VI A
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITA 414
>AY027528-1|AAK13047.1| 783|Homo sapiens 3'-5' RNA exonuclease
protein.
Length = 783
Score = 35.9 bits (79), Expect = 0.16
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIKLIALNIFLFKVEVIIA 369
R DGR+ RN+ V+ KT SA+ + G T V+C + +L + +VI A
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITA 414
>AK027437-1|BAB55109.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14531 fis, clone NT2RM2000371, weakly similar to
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (EC 2.7.7.8).
).
Length = 504
Score = 35.9 bits (79), Expect = 0.16
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIKLIALNIFLFKVEVIIA 369
R DGR+ RN+ V+ KT SA+ + G T V+C + +L + +VI A
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITA 414
>AJ458465-1|CAD30289.1| 783|Homo sapiens polynucleotide
phosphorylase-like protein protein.
Length = 783
Score = 35.9 bits (79), Expect = 0.16
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIKLIALNIFLFKVEVIIA 369
R DGR+ RN+ V+ KT SA+ + G T V+C + +L + +VI A
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITA 414
>AC015982-3|AAY24271.1| 783|Homo sapiens unknown protein.
Length = 783
Score = 35.9 bits (79), Expect = 0.16
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIKLIALNIFLFKVEVIIA 369
R DGR+ RN+ V+ KT SA+ + G T V+C + +L + +VI A
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESGIKSDQVITA 414
>D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein.
Length = 290
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIK 321
R+DGR +++R +++ + + SA VK G+T ++ G+K
Sbjct: 22 RVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVK 62
>BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7
protein.
Length = 291
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 199 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIK 321
R+DGR +++R +++ + + SA VK G+T ++ G+K
Sbjct: 23 RVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVK 63
>BC117219-1|AAI17220.1| 527|Homo sapiens ZNF569 protein protein.
Length = 527
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYS---TYNC 301
H+ HT E C C F+ KEK ++ Y+ +S +Y C
Sbjct: 45 HLRIHTGEKPYECSNCRKAFSHKEKLIKHYKIHSREQSYKC 85
>AY835704-1|AAV97944.1| 686|Homo sapiens ZNF569 protein.
Length = 686
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYS---TYNC 301
H+ HT E C C F+ KEK ++ Y+ +S +Y C
Sbjct: 204 HLRIHTGEKPYECSNCRKAFSHKEKLIKHYKIHSREQSYKC 244
>DQ778127-1|ABH10109.1| 299|Homo sapiens BORIS transcription factor
transcript variant B5 protein.
Length = 299
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 242 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 289
>DQ778126-1|ABH10108.1| 422|Homo sapiens BORIS transcription factor
transcript variant B4 protein.
Length = 422
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 299 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 346
>DQ778125-1|ABH10107.1| 460|Homo sapiens BORIS transcription factor
transcript variant B3 protein.
Length = 460
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 299 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 346
>DQ778124-1|ABH10106.1| 403|Homo sapiens BORIS transcription factor
transcript variant B2 protein.
Length = 403
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 242 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 289
>DQ778123-1|ABH10105.1| 573|Homo sapiens BORIS transcription factor
transcript variant A6 protein.
Length = 573
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ778122-1|ABH10104.1| 627|Homo sapiens BORIS transcription factor
transcript variant A5 protein.
Length = 627
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ778115-1|ABH10097.1| 665|Homo sapiens BORIS transcription factor
transcript variant C3 protein.
Length = 665
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ778112-1|ABH10094.1| 613|Homo sapiens BORIS transcription factor
transcript variant A3 protein.
Length = 613
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 454 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 501
>DQ778111-1|ABH10093.1| 700|Homo sapiens BORIS transcription factor
transcript variant B1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ778110-1|ABH10092.1| 663|Homo sapiens BORIS transcription factor
transcript variant C1 protein.
Length = 663
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ778109-1|ABH10091.1| 663|Homo sapiens BORIS transcription factor
transcript variant A2 protein.
Length = 663
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ778108-1|ABH10090.1| 663|Homo sapiens BORIS transcription factor
transcript variant A1 protein.
Length = 663
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>DQ294738-1|ABB92839.1| 613|Homo sapiens BORIS-like protein
protein.
Length = 613
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 454 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 501
>BC130486-1|AAI30487.1| 663|Homo sapiens CCCTC-binding factor (zinc
finger protein)-like protein.
Length = 663
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>AY071919-1|AAL61541.1| 662|Homo sapiens zinc finger protein CTCF-T
protein.
Length = 662
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>AL160176-2|CAI42956.1| 663|Homo sapiens CCCTC-binding factor (zinc
finger protein)-like protein.
Length = 663
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
>AF336042-1|AAM28645.1| 663|Homo sapiens nuclear DNA binding factor
protein.
Length = 663
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 414 HIPSHTSEHNLSCCLCNDDFNFKEKNVESYQFYSTYNCCITTFNYGRC 271
HI +HT E +C CN F K+ ++ Y N T + +C
Sbjct: 504 HIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKC 551
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,081,549
Number of Sequences: 237096
Number of extensions: 1324131
Number of successful extensions: 3441
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3439
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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