Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30i05
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   1.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   1.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   5.4  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 414 HIPSHTSEHNLSCCLCNDDF 355
           HI +HT E   SC  CN  F
Sbjct: 61  HIRTHTGEKPFSCQHCNRAF 80


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 390 HNLSCCLCNDDFNFKEKN 337
           H+ SCCLC D  N   +N
Sbjct: 351 HSDSCCLCLDSMNAVIRN 368


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 493 EHVCFLPSFSFL*KFCHNFDLI 428
           E +C L S +   +FCHN  ++
Sbjct: 156 ERICILKSITCALQFCHNAGIV 177


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 420 HCHIPSHTSEHNLSCCLCNDDF 355
           H H+  HT E    C +C+  F
Sbjct: 164 HRHMRIHTGERPHKCTVCSKTF 185



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 414 HIPSHTSEHNLSCCLCNDDFNFKE 343
           H  +H  E    C LC++ F  K+
Sbjct: 250 HQVAHYGEKVYKCTLCHETFGSKK 273


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 454 KFCHNFDLIRPALSHPF 404
           K  H FDL+RP ++  F
Sbjct: 242 KITHFFDLVRPLIAFKF 258


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 100 CIFKFISHTFKMSEVYKLIHPVKHFND 180
           CI KF S TF   +V   ++  K+F D
Sbjct: 165 CIMKFGSWTFNGDQVSLALYNNKNFVD 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,628
Number of Sequences: 438
Number of extensions: 3082
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)