Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h24
(673 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0186 + 1491202-1491210,1491401-1491476,1491573-1492075 38 0.007
11_06_0289 - 21969248-21973516 36 0.039
11_04_0200 - 14766546-14766797,14766885-14767151 35 0.068
11_06_0185 + 21018045-21022307 33 0.21
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718... 32 0.36
12_02_0072 + 13218669-13218706,13218715-13218781,13220400-132204... 31 0.63
03_05_0917 + 28774068-28774128,28774293-28774392,28774413-287750... 31 0.63
10_07_0134 + 13289641-13290216,13290435-13290914 30 1.5
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 30 1.9
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 30 1.9
06_03_0267 + 18970578-18972464 29 3.4
12_02_0611 + 21118777-21119066,21119501-21119594,21119742-211201... 29 4.5
11_06_0284 + 21909758-21913645 29 4.5
10_08_0733 - 20183271-20183725,20183860-20183935,20184202-20184210 28 5.9
03_02_0720 + 10662494-10663564 28 5.9
02_05_0246 + 27136590-27138610,27138933-27139056,27139401-271396... 28 5.9
11_06_0331 - 22417469-22418071 28 7.8
11_04_0177 - 14547782-14548142,14549740-14549837,14550020-14550106 28 7.8
09_02_0517 + 10139859-10140245 28 7.8
03_05_0145 + 21254448-21255488 28 7.8
03_03_0225 - 15587557-15588774 28 7.8
03_02_0082 - 5515019-5515087,5515178-5515285,5516032-5516148,551... 28 7.8
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 28 7.8
02_05_0857 - 32278922-32279102,32280386-32280507,32280987-322811... 28 7.8
01_03_0213 - 13860284-13860299,13860480-13860537,13860678-13861107 28 7.8
01_02_0078 - 10894871-10895841,10897268-10898426 28 7.8
>03_01_0186 + 1491202-1491210,1491401-1491476,1491573-1492075
Length = 195
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 489 EKTSNPGGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRKQKA 668
EK GG ++ G+++GG DG+++ G K+G + + ++ +EE G +K A
Sbjct: 76 EKKKEGGGDAKKDGGDGKKEGGGDGKKEGGDGKKEGDGKKGEAAAAAKKEEGGGEKKVAA 135
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 507 GGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRKQK 665
GGG+ EED +R G + ++ R +KG E+RK +EK G ++++
Sbjct: 440 GGGEREEDEKDERGDGEEEGKEERRDMEKG--GEERKEQQQEEQEKEGRKEEQ 490
>11_04_0200 - 14766546-14766797,14766885-14767151
Length = 172
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 492 KTSNPGGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRKQK 665
K PGG KGE+ + GGA GQ+ TG G T + + E+K + K K
Sbjct: 108 KEKLPGGNKGEQQHAMGGTGGAYGQQGHGTGMTTGTTGAHGTTTTDTGEKKGIMDKIK 165
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 507 GGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRKQK 665
GGG+ +ED +R G + ++ R +KG E+RK +EK G ++++
Sbjct: 440 GGGERKEDEKDERGDGEEEGKEERRDMEKG---EERKEQQQEEQEKEGRKEEQ 489
>01_05_0369 -
21468204-21468595,21471417-21471606,21471680-21471867,
21484028-21484580
Length = 440
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 498 SNPGGGKGEEDSSGQRKGGADGQRQRR 578
S+ GGG G D G+RKG G+R+RR
Sbjct: 308 SSKGGGGGAADRPGRRKGRPKGRRRRR 334
>12_02_0072 +
13218669-13218706,13218715-13218781,13220400-13220471,
13222107-13222182,13222309-13222943
Length = 295
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 489 EKTSNPGGGKG-EEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNG 650
+K + GGG G +E G+++ G DG+++ G K+G D+K +E G
Sbjct: 142 KKDAGGGGGDGKKEGGDGKKEEGGDGKKEGE-GKKEGDGGGDKKEGEGKKEGDGG 195
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 510 GGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRK 617
GG G+++ G+++G G ++ G K+G D+K
Sbjct: 164 GGDGKKEGEGKKEGDGGGDKKEGEGKKEGDGGGDKK 199
>03_05_0917 +
28774068-28774128,28774293-28774392,28774413-28775056,
28775567-28775727,28776362-28776430
Length = 344
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 498 SNPGGGKGEEDSS-GQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGL 653
S+ GGG G+ D G GGA + G G E K+VSS+ + GL
Sbjct: 55 SSDGGGVGDGDGDEGHHHGGARDGTEGGGGGGGGRGEEKHKAVSSLASKSRGL 107
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 480 PAFEKTSNPGGGKG-----EEDSSGQRKGGADGQRQRRTGNKKGYTAE 608
P +E + GGG G EED G GG G+++RR ++ T E
Sbjct: 70 PMYEASGGDGGGGGAASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLE 117
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +3
Query: 489 EKTSNPGG----GKGEEDSSGQRKGGADGQR-QRRTGNKKGYTAEDR 614
EKT P G GE+D +G R+ + G R G+K+ + EDR
Sbjct: 10 EKTVEPSAPSTNGSGEKDRAGSRRRSSGGGRDDEERGSKRSRSGEDR 56
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 513 GKG-EEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVR 635
G+G EED G+ K G DG+R+++ ++ TA + +S V+
Sbjct: 23 GQGQEEDVLGREKEGKDGERKKKKKGRRTSTACSAERLSHVK 64
>06_03_0267 + 18970578-18972464
Length = 628
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 498 SNPGGGKGEEDSSGQRKGGADGQRQRRTGNKKG 596
S PG KG SSG+ G+R +R G KKG
Sbjct: 250 SQPGCAKGARGSSGRCIAHGGGRRCQREGCKKG 282
>12_02_0611 +
21118777-21119066,21119501-21119594,21119742-21120182,
21120267-21120866
Length = 474
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 182 ILTPSRNIGGGNNLTFKMKYLSRRRTWNWNQRKSSS 289
ILT + G + +M +L + + W+WN ++ SS
Sbjct: 149 ILTVEKGNGSVQKVATEMSHLFKEKKWDWNVKQISS 184
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +3
Query: 516 KGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRK 659
KG +D + KGG + +++ K+ E+ + EEK G ++
Sbjct: 457 KGRKDKEKKEKGGREERKEEEHHEKQEKEKEEERKEEGQNEEKEGRKE 504
>10_08_0733 - 20183271-20183725,20183860-20183935,20184202-20184210
Length = 179
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 480 PAFEKTSNPGGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRK 659
P ++ GGG G++D GG DG+++ G+KK A + +K K
Sbjct: 74 PEKKEEKKDGGGDGKKD------GGGDGKKEGEAGDKKDGDAAKKDGDKDGEAKKEDGDK 127
Query: 660 QKAA 671
+ AA
Sbjct: 128 KPAA 131
>03_02_0720 + 10662494-10663564
Length = 356
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 480 PAFEKTSNPGGGKGEEDSSGQRKGGADGQRQRRT---GNKKGYTAEDRKSVSSVR 635
P E +S+ GGG+ + + G+ +GG G+R+ T +++ Y A +R +R
Sbjct: 265 PQSEASSDAGGGEEAQATRGRARGG-KGRRRSSTVAAAHERLYAARNRAQAEEMR 318
>02_05_0246 +
27136590-27138610,27138933-27139056,27139401-27139694,
27139776-27139978,27140307-27140589
Length = 974
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 501 NPGGGKGEEDSSGQRKGGADGQRQRR 578
N GGG G D G R GG G RR
Sbjct: 114 NDGGGDGGSDGGGGRGGGGGGGGGRR 139
>11_06_0331 - 22417469-22418071
Length = 200
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 489 EKTSNPGGGKGEEDSSGQRKG-GADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRK 659
E+ S GGG G+ +++ K A+ +R++ TG+ + AE +V++ E + RK
Sbjct: 31 ERASKLGGGGGKAEAAPPLKERDANKKREKATGSAQVVNAESAVAVAAAGGEGDQKRK 88
>11_04_0177 - 14547782-14548142,14549740-14549837,14550020-14550106
Length = 181
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 507 GGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLR 656
GGG+G E++ G GG G+R G AE+R E ++ R
Sbjct: 118 GGGEGGEEAHG---GGGGGRRVEEVAVDAGEEAEERTKAGEGEEAESWRR 164
>09_02_0517 + 10139859-10140245
Length = 128
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +3
Query: 507 GGGKGEEDSSGQRKGGAD----GQRQRRTGNKKGYTAED 611
GGG+ E G+R+GG D G+R+ R G+ ED
Sbjct: 59 GGGRLGEGGVGRRRGGCDDNEEGRRRARWGSAAAVRMED 97
>03_05_0145 + 21254448-21255488
Length = 346
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 489 EKTSNPGGGKGEEDSSGQRKGGAD-GQRQRRTGNKK 593
EK GGG+GE++ + GG + G+ +RRT ++
Sbjct: 93 EKAKAKGGGEGEQEVEKKAIGGMEKGRARRRTPEQR 128
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 507 GGGKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKN-GLRKQ 662
G G G G R GG+ G RQ + G+ +G ++ R ++ R++ GL+++
Sbjct: 257 GAGSGGRGGYGGRGGGSAG-RQPQNGSARGGSSRGRVKKTTARKKVGAGLKRR 308
>03_02_0082 -
5515019-5515087,5515178-5515285,5516032-5516148,
5516263-5516382,5518038-5518868
Length = 414
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 582 GNKKGYTAEDRKSVSSVREEKN 647
G ++G T E RKSVSSV E +N
Sbjct: 30 GGRRGPTPERRKSVSSVPEAEN 51
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 489 EKTSNPGGGKGE-EDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSVREEKNGLRKQK 665
E+ GGGKGE E +R+ + +RR ++ E+ + REE+ +++K
Sbjct: 469 EEEEEGGGGKGEKEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQREK 528
>02_05_0857 -
32278922-32279102,32280386-32280507,32280987-32281101,
32285455-32285858
Length = 273
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +3
Query: 489 EKTSNPGGGKGEEDS--SGQRKG 551
E S+PGGG GE+++ G+RKG
Sbjct: 82 EAESSPGGGSGEDETPEEGRRKG 104
>01_03_0213 - 13860284-13860299,13860480-13860537,13860678-13861107
Length = 167
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 489 EKTSNPGGGKGEEDSSGQRKGGADGQRQR 575
E+TS GG GEE G R+GG + QR R
Sbjct: 73 ERTS---GGGGEEGVEGGREGGGERQRWR 98
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 513 GKGEEDSSGQRKGGADGQRQRRTGNKKGYTAEDRKSVSSV 632
G+GEE + QR +R+R GNKK E+ S S V
Sbjct: 669 GRGEEKRTEQRCRWRRNRREREGGNKKERGWEEADSGSQV 708
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,862,972
Number of Sequences: 37544
Number of extensions: 230237
Number of successful extensions: 1511
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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