Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h23
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024771-10|AAK70664.1|  433|Caenorhabditis elegans Hypothetical...    31   0.61 
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    27   7.5  

>AC024771-10|AAK70664.1|  433|Caenorhabditis elegans Hypothetical
           protein Y40B10A.9 protein.
          Length = 433

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = -2

Query: 86  YCIFINFYPVLK--FVIIFYIICCSRRI 9
           Y IFI  + +L   FVIIFY IC +RR+
Sbjct: 381 YLIFIGIWVLLMVLFVIIFYCICVTRRV 408


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
 Frame = +1

Query: 82  QYCYPEDC-GPXAVAPVLVTSSYPTXCEES-----PTCYPCLPHCPQSMVYWC-DTRP 234
           Q C    C  P   APV    S    CE+S     P    C+P C Q     C  T+P
Sbjct: 111 QSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQCQQQCVQTQP 168


>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
            C26C6.1a protein.
          Length = 1883

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 424  TKYVIPCYRYEDGRIVQKFPVTAFK-RNGMQDQEHSKLL 537
            TKYV PCY Y      +K P+  F+     +D+   K L
Sbjct: 994  TKYVAPCYAYVSRSDEKKTPLHIFRIERTFKDENGEKAL 1032


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
            protein C26C6.1a protein.
          Length = 1883

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 424  TKYVIPCYRYEDGRIVQKFPVTAFK-RNGMQDQEHSKLL 537
            TKYV PCY Y      +K P+  F+     +D+   K L
Sbjct: 994  TKYVAPCYAYVSRSDEKKTPLHIFRIERTFKDENGEKAL 1032


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,151,624
Number of Sequences: 27780
Number of extensions: 222727
Number of successful extensions: 665
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)