Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h21
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c ... 64 4e-10
L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein. 64 5e-10
BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c ... 64 5e-10
BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c ... 64 5e-10
AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein. 64 5e-10
Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c re... 62 1e-09
AK127126-1|BAC86841.1| 164|Homo sapiens protein ( Homo sapiens ... 33 0.82
BC030220-1|AAH30220.1| 438|Homo sapiens netrin G1 protein. 32 1.9
AY781194-1|AAW47415.1| 111|Homo sapiens netrin G1 isoform G1b p... 32 1.9
AY764267-1|AAW47414.1| 153|Homo sapiens netrin G1 isoform G1o p... 32 1.9
AY764266-1|AAW47413.1| 133|Homo sapiens netrin G1 isoform G1n p... 32 1.9
AY764265-1|AAW47412.1| 209|Homo sapiens netrin G1 isoform G1m p... 32 1.9
AY764264-1|AAW47411.1| 57|Homo sapiens netrin G1 isoform G1l p... 32 1.9
AY764263-1|AAW47410.1| 88|Homo sapiens netrin G1 isoform G1e p... 32 1.9
AY764262-1|AAW47409.1| 108|Homo sapiens netrin G1 isoform G1d p... 32 1.9
AY764261-1|AAW47408.1| 66|Homo sapiens netrin G1 isoform G1c p... 32 1.9
AY764260-1|AAW47407.1| 167|Homo sapiens netrin G1 isoform G1a p... 32 1.9
AY358365-1|AAQ88731.1| 438|Homo sapiens YLSR571 protein. 32 1.9
AL590427-6|CAH73385.1| 480|Homo sapiens netrin G1 protein. 32 1.9
AL590427-5|CAH73382.1| 494|Homo sapiens netrin G1 protein. 32 1.9
AL590427-4|CAH73383.1| 438|Homo sapiens netrin G1 protein. 32 1.9
AL590427-3|CAH73381.1| 539|Homo sapiens netrin G1 protein. 32 1.9
AL590427-2|CAH73384.1| 460|Homo sapiens netrin G1 protein. 32 1.9
AL513187-6|CAH73829.1| 480|Homo sapiens netrin G1 protein. 32 1.9
AL513187-5|CAH73831.1| 494|Homo sapiens netrin G1 protein. 32 1.9
AL513187-4|CAH73832.1| 438|Homo sapiens netrin G1 protein. 32 1.9
AL513187-3|CAH73830.1| 539|Homo sapiens netrin G1 protein. 32 1.9
AL513187-2|CAH73833.1| 460|Homo sapiens netrin G1 protein. 32 1.9
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 31 2.5
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 31 2.5
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein. 31 2.5
AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant, at... 31 2.5
>BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 64.1 bits (149), Expect = 4e-10
Identities = 32/109 (29%), Positives = 55/109 (50%)
Frame = +3
Query: 297 VQVRYHKECPRLHRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSY 476
V + H H DI+ P+F+ YR+ + D K+ + + + G +Y + + +Y
Sbjct: 68 VGLNVHASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAY 127
Query: 477 AVKSELVHFISYMXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
A K+ + F+S M IE+ L+ I G +++KWRGKPLF+
Sbjct: 128 AAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFV 176
>L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein.
Length = 274
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +3
Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
M IE+ L+ I G +++KWRGKPLF+
Sbjct: 140 MSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFV 176
>BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +3
Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
M IE+ L+ I G +++KWRGKPLF+
Sbjct: 140 MSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFV 176
>BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +3
Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
M IE+ L+ I G +++KWRGKPLF+
Sbjct: 140 MSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFV 176
>AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein.
Length = 274
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +3
Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
H DI+ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 80 HTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 139
Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
M IE+ L+ I G +++KWRGKPLF+
Sbjct: 140 MSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFV 176
>Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide-like 1
protein.
Length = 272
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/97 (29%), Positives = 52/97 (53%)
Frame = +3
Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
H D++ P+F+ YR+ + D K+ + + + G +Y + + +YA K+ + F+S
Sbjct: 78 HTDVKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSS 137
Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
M IE+ L+ I G +++KWRGKPLF+
Sbjct: 138 MSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFV 174
>AK127126-1|BAC86841.1| 164|Homo sapiens protein ( Homo sapiens
cDNA FLJ45183 fis, clone BRAWH3047946. ).
Length = 164
Score = 33.1 bits (72), Expect = 0.82
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -2
Query: 503 EMY*LGFYSIRSTEQSEEANRVGHSGLLVARTPSCL-SHI--LVLIFPVRIKVWE 348
E+Y +SIR G +GLL TP C S I VL+FPVR +WE
Sbjct: 67 ELYTTCGFSIRKQGSDAHLLEAGGAGLLDLNTPPCCRSRIPGSVLMFPVRAGLWE 121
>BC030220-1|AAH30220.1| 438|Homo sapiens netrin G1 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AY781194-1|AAW47415.1| 111|Homo sapiens netrin G1 isoform G1b
protein.
Length = 111
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 82 NNVRCLCPAAYTGILCEKLRC 102
>AY764267-1|AAW47414.1| 153|Homo sapiens netrin G1 isoform G1o
protein.
Length = 153
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 124 NNVRCLCPAAYTGILCEKLRC 144
>AY764266-1|AAW47413.1| 133|Homo sapiens netrin G1 isoform G1n
protein.
Length = 133
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 104 NNVRCLCPAAYTGILCEKLRC 124
>AY764265-1|AAW47412.1| 209|Homo sapiens netrin G1 isoform G1m
protein.
Length = 209
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 180 NNVRCLCPAAYTGILCEKLRC 200
>AY764264-1|AAW47411.1| 57|Homo sapiens netrin G1 isoform G1l
protein.
Length = 57
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 28 NNVRCLCPAAYTGILCEKLRC 48
>AY764263-1|AAW47410.1| 88|Homo sapiens netrin G1 isoform G1e
protein.
Length = 88
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 59 NNVRCLCPAAYTGILCEKLRC 79
>AY764262-1|AAW47409.1| 108|Homo sapiens netrin G1 isoform G1d
protein.
Length = 108
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 79 NNVRCLCPAAYTGILCEKLRC 99
>AY764261-1|AAW47408.1| 66|Homo sapiens netrin G1 isoform G1c
protein.
Length = 66
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 37 NNVRCLCPAAYTGILCEKLRC 57
>AY764260-1|AAW47407.1| 167|Homo sapiens netrin G1 isoform G1a
protein.
Length = 167
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 138 NNVRCLCPAAYTGILCEKLRC 158
>AY358365-1|AAQ88731.1| 438|Homo sapiens YLSR571 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AL590427-6|CAH73385.1| 480|Homo sapiens netrin G1 protein.
Length = 480
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 423 NNVRCLCPAAYTGILCEKLRC 443
>AL590427-5|CAH73382.1| 494|Homo sapiens netrin G1 protein.
Length = 494
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 437 NNVRCLCPAAYTGILCEKLRC 457
>AL590427-4|CAH73383.1| 438|Homo sapiens netrin G1 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AL590427-3|CAH73381.1| 539|Homo sapiens netrin G1 protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 482 NNVRCLCPAAYTGILCEKLRC 502
>AL590427-2|CAH73384.1| 460|Homo sapiens netrin G1 protein.
Length = 460
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 403 NNVRCLCPAAYTGILCEKLRC 423
>AL513187-6|CAH73829.1| 480|Homo sapiens netrin G1 protein.
Length = 480
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 423 NNVRCLCPAAYTGILCEKLRC 443
>AL513187-5|CAH73831.1| 494|Homo sapiens netrin G1 protein.
Length = 494
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 437 NNVRCLCPAAYTGILCEKLRC 457
>AL513187-4|CAH73832.1| 438|Homo sapiens netrin G1 protein.
Length = 438
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 381 NNVRCLCPAAYTGILCEKLRC 401
>AL513187-3|CAH73830.1| 539|Homo sapiens netrin G1 protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 482 NNVRCLCPAAYTGILCEKLRC 502
>AL513187-2|CAH73833.1| 460|Homo sapiens netrin G1 protein.
Length = 460
Score = 31.9 bits (69), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 120 NNARAICPNLWTGLCCQNLTC 182
NN R +CP +TG+ C+ L C
Sbjct: 403 NNVRCLCPAAYTGILCEKLRC 423
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 493 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 401
S+ + AY PQ P +P+V P + S PH+
Sbjct: 1034 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 1064
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 493 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 401
S+ + AY PQ P +P+V P + S PH+
Sbjct: 746 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 776
>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
Length = 1127
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 493 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 401
S+ + AY PQ P +P+V P + S PH+
Sbjct: 824 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 854
>AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant,
ataxin 2) protein.
Length = 258
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 493 SSDFTAYDPQSNPKKPIV*VTPDFSSPAPHL 401
S+ + AY PQ P +P+V P + S PH+
Sbjct: 54 STQYVAYSPQQFPNQPLVQHVPHYQSQHPHV 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,890,226
Number of Sequences: 237096
Number of extensions: 1872634
Number of successful extensions: 10932
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10931
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -