Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h21
         (624 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p pro...    69   4e-12
AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,...    69   4e-12
AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,...    69   4e-12
BT011477-1|AAR99135.1|  740|Drosophila melanogaster RE10036p pro...    29   5.1  
AE013599-2718|AAF57675.3|  740|Drosophila melanogaster CG15069-P...    29   5.1  
AE013599-2064|AAF58132.1|  491|Drosophila melanogaster CG12960-P...    29   6.8  

>BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p
           protein.
          Length = 260

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = +3

Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
           H D++ P+F+ YR++  KD R+ R    +E+   +Y +   G + G+YA K  +  FI  
Sbjct: 37  HTDLQVPDFSAYRRESVKDSRR-RNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95

Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
           M           IE+ L+ I  G  V++KWRGKPLFI
Sbjct: 96  MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFI 132


>AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,
           isoform B protein.
          Length = 230

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = +3

Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
           H D++ P+F+ YR++  KD R+ R    +E+   +Y +   G + G+YA K  +  FI  
Sbjct: 37  HTDLQVPDFSAYRRESVKDSRR-RNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95

Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
           M           IE+ L+ I  G  V++KWRGKPLFI
Sbjct: 96  MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFI 132


>AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,
           isoform A protein.
          Length = 260

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = +3

Query: 333 HRDIEFPNFNPYRKDQYKDVRKTRWGAGDEKSGVTYTIGFFGLLCGSYAVKSELVHFISY 512
           H D++ P+F+ YR++  KD R+ R    +E+   +Y +   G + G+YA K  +  FI  
Sbjct: 37  HTDLQVPDFSAYRRESVKDSRR-RNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95

Query: 513 MXXXXXXXXXXSIEVDLTKITPGACVSYKWRGKPLFI 623
           M           IE+ L+ I  G  V++KWRGKPLFI
Sbjct: 96  MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFI 132


>BT011477-1|AAR99135.1|  740|Drosophila melanogaster RE10036p
           protein.
          Length = 740

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 426 TSRRPHPILSFSHPCIDLSCTD*SLGIRYRGEDEDI 319
           TS   + +L  SH  +D +C+D  + +RYR    D+
Sbjct: 305 TSNPGYQVLHSSHSTLDRTCSDSVVSLRYRKSTSDL 340


>AE013599-2718|AAF57675.3|  740|Drosophila melanogaster CG15069-PA,
           isoform A protein.
          Length = 740

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 426 TSRRPHPILSFSHPCIDLSCTD*SLGIRYRGEDEDI 319
           TS   + +L  SH  +D +C+D  + +RYR    D+
Sbjct: 305 TSNPGYQVLHSSHSTLDRTCSDSVVSLRYRKSTSDL 340


>AE013599-2064|AAF58132.1|  491|Drosophila melanogaster CG12960-PA
           protein.
          Length = 491

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 417 DEKSGVTYTIGFFGLLCGSYAVK-SELVHFI 506
           DEKSG T  +G+ G +  +YA K +  +HFI
Sbjct: 97  DEKSGETKMMGYLGHMINTYAQKLNAKLHFI 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,010,386
Number of Sequences: 53049
Number of extensions: 602423
Number of successful extensions: 1281
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)