Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h18
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK055200-1|BAB70872.1|  799|Homo sapiens protein ( Homo sapiens ...    31   5.9  

>AK055200-1|BAB70872.1|  799|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30638 fis, clone CTONG2002721, weakly similar to
           VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13. ).
          Length = 799

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +1

Query: 196 KRELQRDVNPITCDNDL-VEKVMNNYVIVKRILRVLSWQEKMIC---KHVCSLWHSAVLA 363
           K ELQ  +NP+ C+ D+ +   +N+ +  +++  V      M     KH+ SL  +    
Sbjct: 670 KAELQIKLNPVCCELDISIVDRLNSLLQPQKLATVEMMASHMYTSYNKHI-SLHKAFTEV 728

Query: 364 LLKEQQGPADCVIALQHAS 420
            L +   PA+C I++Q A+
Sbjct: 729 FLDDSHSPANCRISVQVAT 747


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,180,863
Number of Sequences: 237096
Number of extensions: 2121083
Number of successful extensions: 3248
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3247
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)