Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h18
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                25   0.76 
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   5.4  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   5.4  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   7.1  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 12/53 (22%), Positives = 28/53 (52%)
 Frame = +1

Query: 325 KHVCSLWHSAVLALLKEQQGPADCVIALQHASSKSIMKFKQSGILYNEPLAVL 483
           KH   L HS ++ +L  +QG +  +I ++   +    +  ++ ++ NE + +L
Sbjct: 109 KHASFLKHSNIVKVLMIEQGASLSLITMELCGTTLQNRLDEAILIKNERICIL 161


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +3

Query: 210 KRC*SYNMRQRLGRESYEQLCYS*TNIKSFVVAGKNDMQACMFVVAFCCISTTERATGAC 389
           K C    +    G E Y +  Y    +   V AG  D    +  +A  CI   +  T  C
Sbjct: 70  KACVMKRIEMLKGTELYVEPVYKMIEV---VHAGNADDIQLVKGIANECIENAKGETDEC 126

Query: 390 *LCHSTTTCLIKK 428
            + +  T C I+K
Sbjct: 127 NIGNKYTDCYIEK 139


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +3

Query: 210 KRC*SYNMRQRLGRESYEQLCYS*TNIKSFVVAGKNDMQACMFVVAFCCISTTERATGAC 389
           K C    +    G E Y +  Y    +   V AG  D    +  +A  CI   +  T  C
Sbjct: 70  KACVMKRIEMLKGTELYVEPVYKMIEV---VHAGNADDIQLVKGIANECIENAKGETDEC 126

Query: 390 *LCHSTTTCLIKK 428
            + +  T C I+K
Sbjct: 127 NIGNKYTDCYIEK 139


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 316 MICKHVCSLWHSAVLALLKEQQGPADC--VIALQHASSKSIMK 438
           ++C   C+L H+  +A+L  Q+   D   + ++  A+S+  MK
Sbjct: 8   LLCVIYCALVHADTVAILCSQKAGFDLSDLKSMYEANSEEQMK 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,270
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)