Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h17
         (438 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-26|ABI31225.1|  306|Drosophila melanogaster CG34140-PA,...    43   2e-04
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro...    28   4.8  
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA...    28   4.8  

>AE014296-26|ABI31225.1|  306|Drosophila melanogaster CG34140-PA,
           isoform A protein.
          Length = 306

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/57 (42%), Positives = 32/57 (56%)
 Frame = +1

Query: 136 RYLTFFSYIGTGFRSSEKIWLKENRNLPDPESVQGMMELSLLKLRSLNYPNVTLSSR 306
           RYL   SYIGT FR  +K   K  ++  D +S+QG +EL+L      N  +  LSSR
Sbjct: 3   RYLLNISYIGTTFRGIQKTVNKLEQSRLDTKSIQGCLELALQVFHPTNEIHTVLSSR 59


>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p
           protein.
          Length = 1238

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 133 ARYLTFFSYIGTGFRSSEKIWLKENRNLPDPE-SVQGMMELSLLKLRSLNY 282
           A  L F +     FR+ E I L+  RNL   + S  G+  +S + L++LN+
Sbjct: 811 ANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNW 861


>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
           protein.
          Length = 1535

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 133 ARYLTFFSYIGTGFRSSEKIWLKENRNLPDPE-SVQGMMELSLLKLRSLNY 282
           A  L F +     FR+ E I L+  RNL   + S  G+  +S + L++LN+
Sbjct: 811 ANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNW 861


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,359,065
Number of Sequences: 53049
Number of extensions: 275892
Number of successful extensions: 295
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)