Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h17
         (438 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            25   0.48 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   1.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   1.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.9  

>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 127 MKARYLTFFSYIGTGFRSSEKIWLKENRNL 216
           M  R +TFF  + TGF   E  WLK+   L
Sbjct: 35  MLGRKITFFC-MATGFPRPEITWLKDGIEL 63


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 160 IGTGFRSSEKIWLKENRN 213
           +  GF SS   WL+ N N
Sbjct: 426 VSAGFSSSSNTWLRVNEN 443


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 160 IGTGFRSSEKIWLKENRN 213
           +  GF SS   WL+ N N
Sbjct: 426 VSAGFSSSSNTWLRVNEN 443


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 172 FRSSEKIWLKENRNLPDPESVQGMMELS 255
           F++    W KEN++   P S  G  E+S
Sbjct: 318 FQNRRMKWKKENKSKGTPGSGDGDTEIS 345


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 333 VSVVTAFSLPARQSNVRI 280
           ++V T  S+P+  SNVRI
Sbjct: 410 ITVTTDASVPSLVSNVRI 427


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 202 ENRNLPDPESVQGMMELSLLKLRSLNYPN 288
           +NR  P+P +V   +   L +LR+L   N
Sbjct: 513 DNRRRPNPGTVFARLLSVLTELRTLGNQN 541


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,377
Number of Sequences: 438
Number of extensions: 2133
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)