Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h14
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0227 - 15894357-15894494,15894587-15894655,15894837-158949... 109 2e-24
02_05_0381 - 28483425-28483458,28483588-28483658,28483746-284838... 42 5e-04
08_01_0408 - 3616655-3617108,3617190-3617596,3618120-3618287 41 0.001
02_04_0220 - 21014225-21014386,21014492-21014572,21014739-210149... 39 0.004
11_06_0179 + 20952070-20955228 38 0.011
05_04_0387 - 20834510-20834978,20836866-20837329,20837458-20837634 38 0.011
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 37 0.015
02_05_0821 - 32019775-32019882,32020296-32020352,32020614-320206... 36 0.034
01_07_0380 + 43181564-43181639,43182053-43182218,43182494-431826... 35 0.060
09_03_0078 + 12137124-12137672 35 0.079
04_03_0735 + 19141038-19143227 35 0.079
02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559,533... 35 0.079
04_03_0283 + 13887388-13887573,13887711-13887806,13888517-138886... 33 0.18
08_01_0225 - 1819193-1819725,1821031-1821319,1821456-1821488 33 0.24
01_06_1526 + 38003071-38003247,38003338-38003690,38004489-38004987 33 0.24
06_03_0339 - 19687749-19690805 33 0.32
06_01_0806 - 6048042-6048138,6048461-6048550,6049362-6049425,604... 32 0.42
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 32 0.42
02_03_0378 + 18327622-18329826 32 0.56
06_03_0032 - 15697530-15697669,15699215-15699437,15699823-156999... 31 0.74
03_06_0568 - 34778408-34778710,34779340-34779411,34779549-347796... 31 0.74
03_02_0438 + 8470290-8470378,8470900-8470990,8471074-8471134,847... 30 1.7
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 30 2.2
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 30 2.2
03_03_0278 - 16126803-16129049 30 2.2
06_03_0151 + 17270688-17270698,17271149-17271281,17271548-172715... 29 3.0
12_02_1085 - 25935688-25935948,25936589-25936657,25937244-259373... 28 6.9
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 28 6.9
02_04_0657 + 24786717-24786924,24786925-24786965,24787379-247875... 28 6.9
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 28 9.1
>12_02_0227 -
15894357-15894494,15894587-15894655,15894837-15894902,
15895130-15895219,15895312-15895408,15896449-15896771
Length = 260
Score = 109 bits (262), Expect = 2e-24
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +3
Query: 132 CWSCGKDPKTLVVNLFCSNCNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYL 311
CWSCG L C +C ++Q + +YF+I G+ Y + +N+L KYKD QK L
Sbjct: 75 CWSCGASGAFLS----CGSCGSVQPVDPAVDYFRIFGLEREYTIKDNNLEGKYKDWQKKL 130
Query: 312 HPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDI-PEKTEVDQEFL 488
HPD ++ ++E+ + + S+LV +AY+TL +PL+R +Y+LQL G I EKT D E L
Sbjct: 131 HPDLVHSKSEKERAFAAEQSALVIDAYRTLSKPLSRALYLLQLEGIPIDEEKTITDPELL 190
Query: 489 MKIMXXXXXXXXXXXXXXXXXXXXXXXXKIQSLQKQLSTAFFEGDLKRVTKLLTQLKYY 665
M++M K+++ AF D R K +++YY
Sbjct: 191 MEMMEIREAVNDANDSQTLEKIQSQIKRKLETWSHSFQEAFERRDFDRAVKATQRMRYY 249
>02_05_0381 -
28483425-28483458,28483588-28483658,28483746-28483819,
28483975-28484050,28484129-28484206,28485557-28485589
Length = 121
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +3
Query: 195 ALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSS 374
A +KP +D Y+K++ V YD +++ + Y+ L HPDK+ K + +++ K+
Sbjct: 4 ASEKPPHKD-YYKVLEVD--YDASDDTIKLSYRRLALMWHPDKH----KGDNDVTAKFQE 56
Query: 375 LVNEAYKTLLEPLARGIYML 434
+NEAY L +P R Y L
Sbjct: 57 -INEAYTVLSDPAKRLEYDL 75
>08_01_0408 - 3616655-3617108,3617190-3617596,3618120-3618287
Length = 342
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 222 NYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTL 401
+Y+ ++ V+ + E DL K Y+ + HPDK K+E E K ++EAY+ L
Sbjct: 4 DYYNVLKVNR--NATEEDLKKSYRRMAMKWHPDKNPGDKKKEAEAKFK---KISEAYEVL 58
Query: 402 LEPLARGIY 428
+P R IY
Sbjct: 59 SDPQKRAIY 67
>02_04_0220 -
21014225-21014386,21014492-21014572,21014739-21014938,
21014999-21015157,21015248-21015377,21015520-21015673,
21015785-21015867,21015981-21016040,21016131-21016217
Length = 371
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +3
Query: 213 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAY 392
KE ++ ++GV +++++ K Y + +HPDK N + + +EK+ +L EAY
Sbjct: 3 KETEFYDVLGVCPA--ASDDEIRKAYYIKARQVHPDKNPN----DPQAAEKFQAL-GEAY 55
Query: 393 KTLLEPLARGIY 428
+ L +PL R Y
Sbjct: 56 QVLSDPLQRKAY 67
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/100 (30%), Positives = 48/100 (48%)
Frame = +3
Query: 165 VVNLFCSNCNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKE 344
++N+ +C A N + +++ I+ V T D E + K+Y+ L LHPD K
Sbjct: 47 LLNICHVHCAAEATVNGQTDWYGILQVEATAD--EATIRKQYRKLAFSLHPD------KN 98
Query: 345 EQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEK 464
+E LV EA+ L +P R IY ++ +IP K
Sbjct: 99 SFAGAEAAFKLVAEAHSLLCDPTKRPIY--DIKRNNIPRK 136
>05_04_0387 - 20834510-20834978,20836866-20837329,20837458-20837634
Length = 369
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 210 NKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEA 389
N + Y++I+ +S D + ++ YK L + HPDK+ K E E K + EA
Sbjct: 3 NPPELYYRILNISR--DTSPKEIRAAYKTLVRQWHPDKHPPSSKNEAEARFK---AITEA 57
Query: 390 YKTLLE 407
Y+ LL+
Sbjct: 58 YEALLD 63
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/87 (24%), Positives = 49/87 (56%)
Frame = +3
Query: 216 EDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYK 395
E++ + ++G++ + ++ +++ K+Y L +HPDK + +E + +N A+K
Sbjct: 330 ENSPYDVVGIN--WKMSSDNIKKRYWKLSLLVHPDKCPHPSAQEAFVK------LNNAFK 381
Query: 396 TLLEPLARGIYMLQLRGKDIPEKTEVD 476
L +P RG+ +++ K+ E+ EV+
Sbjct: 382 DLQDPEKRGVIDEKIKKKEEMEQFEVE 408
>02_05_0821 -
32019775-32019882,32020296-32020352,32020614-32020687,
32021508-32021583,32021796-32021873,32022130-32022228
Length = 163
Score = 35.9 bits (79), Expect = 0.034
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +3
Query: 213 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAY 392
K +Y+KI+ V YD +E + Y L HPDK K+ +E + +NEAY
Sbjct: 31 KPKDYYKILEVG--YDASEEAIRSSYIRLALKWHPDK-----KQGEENATSRFQEINEAY 83
Query: 393 KTLLEPLARGIY 428
+ L P R Y
Sbjct: 84 QVLSNPAKRREY 95
>01_07_0380 +
43181564-43181639,43182053-43182218,43182494-43182695,
43182789-43182949,43183079-43183172,43183250-43183462,
43184917-43185135,43185458-43185661
Length = 444
Score = 35.1 bits (77), Expect = 0.060
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +3
Query: 204 KPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYA-NRVKEE---QEISEKYS 371
K +K +++KI+G+S+T + D+ + YK L HPDK NR + E +EI+ Y
Sbjct: 320 KLSKRKDWYKILGISKT--ASAADIKRAYKKLALQWHPDKNVDNREEAENMFREIAAAYE 377
Query: 372 SLVNE 386
L +E
Sbjct: 378 VLGDE 382
>09_03_0078 + 12137124-12137672
Length = 182
Score = 34.7 bits (76), Expect = 0.079
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 216 EDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYK 395
ED+Y+K++ + ++ ++ + Y+ L HPD + E S + + AY+
Sbjct: 52 EDDYYKVLSLDRAGEVGAEEIRRAYRRLALRYHPDACPPSRRAE---STRLFLQLRRAYE 108
Query: 396 TLLEPLARGIYMLQL 440
TL +P R Y +L
Sbjct: 109 TLSDPALRVRYDAEL 123
>04_03_0735 + 19141038-19143227
Length = 729
Score = 34.7 bits (76), Expect = 0.079
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +3
Query: 195 ALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEE--QEISEKY 368
A K + E ++++I+ ++ D E ++ K+Y+ L LHPDK + EE + ISE +
Sbjct: 53 AESKIDGESDWYRILSLTAFAD--EEEVKKQYRKLALQLHPDKNKSVGAEEAFKLISEAW 110
Query: 369 SSLVNEAYKTLLE 407
S L + + K L +
Sbjct: 111 SVLSDNSKKVLYD 123
>02_01_0713 -
5332145-5332351,5332675-5332893,5334347-5334559,
5334637-5334730,5334860-5335020,5335114-5335315,
5335619-5335784,5336208-5336286
Length = 446
Score = 34.7 bits (76), Expect = 0.079
Identities = 25/86 (29%), Positives = 46/86 (53%)
Frame = +3
Query: 204 KPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVN 383
K +K +++KI+G+S+T E + + YK L HPDK ++ +E + + + ++
Sbjct: 321 KLSKRKDWYKILGISKTASAAE--IKRAYKKLALQWHPDKNVDKREEAENMFREIAA--- 375
Query: 384 EAYKTLLEPLARGIYMLQLRGKDIPE 461
AY+ L + R Y RG+D+ E
Sbjct: 376 -AYEVLGDEDKRVRYD---RGEDLDE 397
>04_03_0283 +
13887388-13887573,13887711-13887806,13888517-13888637,
13888734-13888840,13888949-13889166,13890219-13890396,
13890492-13890611,13891601-13891687,13892401-13892511,
13892618-13893439
Length = 681
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 264 NENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIY 428
+E+D+ K Y+ L HPDK + E + + +++AY+ L +P++R Y
Sbjct: 111 SESDIKKSYRRLSIQYHPDK-----NPDPEAHKYFVEFISKAYQALTDPVSRENY 160
>08_01_0225 - 1819193-1819725,1821031-1821319,1821456-1821488
Length = 284
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/92 (25%), Positives = 44/92 (47%)
Frame = +3
Query: 213 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAY 392
K++ K S+ +DL NDL + YK L + P + + +E + K L ++
Sbjct: 4 KKEQPVKEPPASDEFDLVLNDLPESYKKLMEDAIPTRLEQIIIQEAPSNSKGKKLFSKVA 63
Query: 393 KTLLEPLARGIYMLQLRGKDIPEKTEVDQEFL 488
+ L P G ++++L+ P K+ D+E +
Sbjct: 64 ERLYTPKG-GTFLVKLK----PTKSSPDEEIV 90
>01_06_1526 + 38003071-38003247,38003338-38003690,38004489-38004987
Length = 342
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 210 NKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEA 389
N + Y +I+ + + + ++ YK L K HPDK+ K E E K + EA
Sbjct: 3 NPPELYHRILNIPR--ETSPQEIRAAYKSLVKKWHPDKHPPSSKPEAEARFK---AITEA 57
Query: 390 YKTLLE 407
Y+ LL+
Sbjct: 58 YEALLD 63
>06_03_0339 - 19687749-19690805
Length = 1018
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +3
Query: 186 NCNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEK 365
+C + K N E +++ I+ V T D + + K+Y+ L LHPDK N +E
Sbjct: 55 HCASATKVNGEIDWYGILQVPVTAD--DTLIKKQYRKLALLLHPDK--NNFAG----AEA 106
Query: 366 YSSLVNEAYKTLLEPLARGIY 428
LV EA TL + R +Y
Sbjct: 107 AFKLVGEANMTLTDRSKRSVY 127
>06_01_0806 -
6048042-6048138,6048461-6048550,6049362-6049425,
6049504-6049552,6050403-6050459,6050953-6051024,
6051912-6052003,6052542-6052614,6052686-6052748,
6052837-6052901,6053803-6053890,6053974-6054015,
6054097-6054188,6054601-6054688,6055134-6055225,
6055368-6055419
Length = 391
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 165 VVNLFCSNCNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKE 344
V ++ N Q + E +Y+KI+GV + D ++ ++ + + L K HPD
Sbjct: 7 VASILVINAMDGQHSSPEKDYYKILGVPK--DASQEEIKRAFHSLAKRYHPDTNRGNTAA 64
Query: 345 E---QEISEKYSS 374
+ QEI + Y +
Sbjct: 65 KRTFQEIRDAYEA 77
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 213 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNE 386
KE N G ET + N + +KY +K L + N V+EEQE ++K S+L E
Sbjct: 2256 KEGNNMSSQG--ETMEEKTNFMLEKYSVSEKDLKRSEKLNDVEEEQEENDKTSTLKEE 2311
>02_03_0378 + 18327622-18329826
Length = 734
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +3
Query: 204 KPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDK 323
K + E+++++I+ +S + D E ++ K+Y+ L LHPDK
Sbjct: 66 KVDGENDWYRILSLSASAD--EEEVKKQYRKLALQLHPDK 103
>06_03_0032 - 15697530-15697669,15699215-15699437,15699823-15699929,
15700047-15700224,15700393-15700455,15700474-15700602,
15701211-15701430,15702162-15702262,15702954-15703062,
15705169-15705290,15705473-15705515,15705848-15705903,
15705983-15706089,15706167-15706342,15706507-15706618,
15706711-15706759,15707184-15707276,15707452-15707571,
15707686-15707787,15709442-15709540,15710103-15710237,
15710421-15710499,15710747-15710822,15710904-15710993,
15711139-15711217,15711304-15711338,15711457-15711531,
15712628-15713375
Length = 1221
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 189 CNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKY 368
C+ + +ED Y++++GV+E + + Y+ LQK HPD + Y
Sbjct: 967 CSTTRGKARED-YYQVLGVTE--------IKEAYRKLQKRHHPDIAGYK-------GHDY 1010
Query: 369 SSLVNEAYKTLL 404
+ L+NEAYK L+
Sbjct: 1011 TLLLNEAYKVLM 1022
>03_06_0568 -
34778408-34778710,34779340-34779411,34779549-34779635,
34779722-34779880,34780641-34780739,34780823-34780903,
34781007-34781461,34781550-34781679,34781952-34782743
Length = 725
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +3
Query: 222 NYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTL 401
+++ +G +++ + L ++YK +HPDK K ++ + L N AY+ L
Sbjct: 434 DHYSALGFHRYENIDVSLLKREYKKKAMLVHPDKNMGNDK----AADAFKKLQN-AYEVL 488
Query: 402 LEPLARGIYMLQLRGKDI 455
L+ L R Y +LR +++
Sbjct: 489 LDSLKRKTYDDELRREEL 506
>03_02_0438 +
8470290-8470378,8470900-8470990,8471074-8471134,
8471678-8471755,8471891-8471964,8472689-8472802,
8472881-8472988,8473937-8473975,8474046-8474132
Length = 246
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +3
Query: 252 TYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYM 431
++D + +++ K+Y+ L +HPDK + + E +++L +A + LL+P RG +
Sbjct: 46 SFDSSADEVKKQYRKLSLLVHPDKC-----KHPKAQEAFAALA-KAQQLLLDPQERGYIL 99
Query: 432 LQL 440
Q+
Sbjct: 100 DQV 102
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 249 ETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLV 380
+ YD + ++ + Y D + H D + VKEE+E S+K SS V
Sbjct: 13 DEYDDDYDEYDEDYDDYGETGHSDDIQHPVKEEKESSKKSSSTV 56
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 249 ETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLV 380
+ YD + ++ + Y D + H D + VKEE+E S+K SS V
Sbjct: 13 DEYDDDYDEYDEDYDDYGETGHSDDIQHPVKEEKESSKKSSSTV 56
>03_03_0278 - 16126803-16129049
Length = 748
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 216 EDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYK 395
E +++ I+ V + D + L K+Y+ L LHPD K + +E +V EA+
Sbjct: 64 EKDWYSILSVESSAD--DETLKKQYRKLVLQLHPD------KNKSVGAEGAFKMVQEAWT 115
Query: 396 TLLEPLARGIY 428
L + R +Y
Sbjct: 116 VLSDKTKRALY 126
>06_03_0151 + 17270688-17270698,17271149-17271281,17271548-17271589,
17271706-17271815,17271957-17272035,17272114-17272287,
17272386-17272466,17272761-17272988,17273067-17273402,
17273501-17273586,17273642-17273783,17274596-17274687,
17274770-17274904,17275142-17275304,17275393-17275482,
17275568-17275753,17276109-17276141,17276700-17276762,
17276839-17276901,17276983-17277042,17277258-17277410,
17277530-17277613,17278434-17278610,17278685-17278791,
17278858-17279071,17279158-17279261,17279926-17280061,
17280191-17280316,17280682-17280792,17280968-17281066,
17281367-17281633,17281707-17281822,17281853-17282084,
17282597-17282664,17282682-17282807,17282980-17283040
Length = 1495
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 219 DNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKT 398
++Y++++GV T + ++ + Y+ LQK H + + Y+ L+NEAYK
Sbjct: 1439 EDYYQVLGV--TVNSTPQEIKEAYRKLQKRHHI-----LILLATRVMHDYTLLLNEAYKV 1491
Query: 399 LL 404
L+
Sbjct: 1492 LM 1493
>12_02_1085 -
25935688-25935948,25936589-25936657,25937244-25937315,
25937693-25937791,25937927-25938007,25938099-25938586,
25938728-25938857,25939994-25940239
Length = 481
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +3
Query: 225 YFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLL 404
+++++G+ +++ L K+Y + +HPDK E + L AY+ L
Sbjct: 264 HYEVLGIPRNRSIDQKILKKEYHRMVLLVHPDKNMG----NPLACESFKKL-QSAYEVLS 318
Query: 405 EPLARGIYMLQLRGKDIPEKTE 470
+ + Y QLR ++ + T+
Sbjct: 319 DFTKKNTYDDQLRKEESRKMTQ 340
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 739 SIFKFCYLIIPLLRITDCIWLSI 671
S+ FCY + +LRI+ WLS+
Sbjct: 947 SVLFFCYALTEVLRISSSTWLSV 969
>02_04_0657 +
24786717-24786924,24786925-24786965,24787379-24787521,
24787597-24787774,24788054-24788123,24788197-24788345,
24788491-24788586,24789213-24789283,24789879-24789940,
24790175-24790238,24790326-24790410,24790515-24790641,
24790714-24790775,24790863-24790923,24790987-24791147,
24791355-24791648
Length = 623
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 198 LQKPNKEDNYFKIMG--VSETYDLNENDLAKKYKDLQKYLH 314
L + K DN+ +G S+ Y ++ LAKKY+DLQ + H
Sbjct: 276 LHRDIKPDNFLMGLGRKASQVYVIDYG-LAKKYRDLQTHKH 315
>11_04_0474 + 18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 288 YKDLQKYLHPDKYANRVKEEQEI-SEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEK 464
Y D QK L + A R+KE+ ++ + + LV + TLL A+ I + + G+ + +K
Sbjct: 1061 YDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNS-AKFIEVDHIHGEILRKK 1119
Query: 465 TEVDQE 482
E D+E
Sbjct: 1120 EEQDRE 1125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,304
Number of Sequences: 37544
Number of extensions: 248249
Number of successful extensions: 661
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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