Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h08
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132784-1|AAI32785.1| 1116|Homo sapiens ELKS/RAB6-interacting/C... 34 0.55
BC132782-1|AAI32783.1| 1116|Homo sapiens ELKS/RAB6-interacting/C... 34 0.55
AB053471-1|BAC54110.1| 1116|Homo sapiens ELKS epsilon protein. 34 0.55
BC150248-1|AAI50249.1| 992|Homo sapiens ELKS/RAB6-interacting/C... 33 0.95
BC068006-1|AAH68006.1| 627|Homo sapiens ERC1 protein protein. 33 0.95
AB053470-1|BAC54109.1| 1088|Homo sapiens ELKS delta protein. 33 0.95
AB053468-1|BAC54107.1| 992|Homo sapiens ELKS beta protein. 33 0.95
AB029004-1|BAA83033.2| 1003|Homo sapiens KIAA1081 protein protein. 33 0.95
AB015617-1|BAA88763.1| 948|Homo sapiens ELKS protein. 33 0.95
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 32 1.7
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 32 1.7
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 31 3.8
AJ132949-1|CAB36967.1| 585|Homo sapiens rfg5 protein protein. 31 3.8
AF458591-1|AAM49719.1| 590|Homo sapiens hypothetical protein pr... 31 3.8
U06698-1|AAA20231.1| 1032|Homo sapiens neuronal kinesin heavy ch... 31 5.1
BC150208-1|AAI50209.1| 1032|Homo sapiens kinesin family member 5... 31 5.1
BC146670-1|AAI46671.1| 1032|Homo sapiens kinesin family member 5... 31 5.1
BC113524-1|AAI13525.1| 578|Homo sapiens IFT74 protein protein. 30 6.7
BC023634-1|AAH23634.2| 383|Homo sapiens IFT74 protein protein. 30 6.7
BC023021-1|AAH23021.1| 731|Homo sapiens golgi autoantigen, golg... 30 6.7
AY644768-1|AAV85456.1| 731|Homo sapiens cell proliferation-indu... 30 6.7
AY040325-1|AAK77221.1| 600|Homo sapiens capillary morphogenesis... 30 6.7
AL356133-4|CAH72643.1| 600|Homo sapiens intraflagellar transpor... 30 6.7
AK023707-1|BAB14650.1| 435|Homo sapiens protein ( Homo sapiens ... 30 6.7
AF085199-1|AAD09753.1| 731|Homo sapiens golgin-84 protein. 30 6.7
AB210045-1|BAE06127.1| 1043|Homo sapiens KIF5A variant protein p... 30 6.7
M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein. 30 8.9
>BC132784-1|AAI32785.1| 1116|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 1116
Score = 33.9 bits (74), Expect = 0.55
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K QLK EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKVEQLKEEL 447
>BC132782-1|AAI32783.1| 1116|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 1116
Score = 33.9 bits (74), Expect = 0.55
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K QLK EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKVEQLKEEL 447
>AB053471-1|BAC54110.1| 1116|Homo sapiens ELKS epsilon protein.
Length = 1116
Score = 33.9 bits (74), Expect = 0.55
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K QLK EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKVEQLKEEL 447
>BC150248-1|AAI50249.1| 992|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 992
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K Q+K EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKIGQVKQEL 447
>BC068006-1|AAH68006.1| 627|Homo sapiens ERC1 protein protein.
Length = 627
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K Q+K EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKIGQVKQEL 447
>AB053470-1|BAC54109.1| 1088|Homo sapiens ELKS delta protein.
Length = 1088
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K Q+K EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKIGQVKQEL 447
>AB053468-1|BAC54107.1| 992|Homo sapiens ELKS beta protein.
Length = 992
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K Q+K EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKIGQVKQEL 447
>AB029004-1|BAA83033.2| 1003|Homo sapiens KIAA1081 protein protein.
Length = 1003
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K Q+K EL
Sbjct: 401 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKIGQVKQEL 458
>AB015617-1|BAA88763.1| 948|Homo sapiens ELKS protein.
Length = 948
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 440 ELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSEL 619
++++ +G +RD++EEI LK+ ++ E + + K +V H K K K Q+K EL
Sbjct: 390 KISSMERG-LRDLEEEIQMLKSNGALSTEEREEEM-KQMEVYRSHSKFMKNKIGQVKQEL 447
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 32.3 bits (70), Expect = 1.7
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 404 LNEIKE----KTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSE 571
+NE+K+ K QIE L K ++ E +L+ Q+T A + ++ +K + +
Sbjct: 961 INELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQNN 1020
Query: 572 HVKNAKEKFSQLKSELHG 625
+ K ++E F QL+S+ +G
Sbjct: 1021 YEK-SQETFKQLQSDFYG 1037
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 32.3 bits (70), Expect = 1.7
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 404 LNEIKE----KTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSE 571
+NE+K+ K QIE L K ++ E +L+ Q+T A + ++ +K + +
Sbjct: 961 INELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQNN 1020
Query: 572 HVKNAKEKFSQLKSELHG 625
+ K ++E F QL+S+ +G
Sbjct: 1021 YEK-SQETFKQLQSDFYG 1037
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 404 LNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKN 583
L +EKT +++ A +RD + EI L+ Q+ A IQ++ + ++ + +
Sbjct: 624 LEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIAD 683
Query: 584 AKEKFSQLKSEL 619
+ + +L+ EL
Sbjct: 684 MEAQVHKLREEL 695
>AJ132949-1|CAB36967.1| 585|Homo sapiens rfg5 protein protein.
Length = 585
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 404 LNEIKEKTGQIEELTAFTKGS----IRDVDEEIMRLKNQITIAQEAMSKPI 544
L +K++ IEE TK + I+D DEEI +L+NQ+T + S P+
Sbjct: 535 LERLKQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLSNSSPV 585
>AF458591-1|AAM49719.1| 590|Homo sapiens hypothetical protein
protein.
Length = 590
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 404 LNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKN 583
L +EKT +++ A +RD + EI L+ Q+ A IQ++ + ++ + +
Sbjct: 301 LEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIAD 360
Query: 584 AKEKFSQLKSEL 619
+ + +L+ EL
Sbjct: 361 MEAQVHKLREEL 372
>U06698-1|AAA20231.1| 1032|Homo sapiens neuronal kinesin heavy chain
protein.
Length = 1032
Score = 30.7 bits (66), Expect = 5.1
Identities = 19/97 (19%), Positives = 48/97 (49%)
Frame = +2
Query: 395 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 574
SQ + ++K++ EEL T+G V E+ L+++ A++ + + +Q +++ +
Sbjct: 439 SQLIEKLKQQMLDQEELLVSTRGDNEKVQRELSHLQSENDAAKDEVKEVLQALEELAVNY 498
Query: 575 VKNAKEKFSQLKSELHGLIYSMFPNTSALIIEFMGQL 685
+ ++E + KS+ + L+ A ++ +L
Sbjct: 499 DQKSQE--VEEKSQQNQLLVDELSQKVATMLSLESEL 533
>BC150208-1|AAI50209.1| 1032|Homo sapiens kinesin family member 5A
protein.
Length = 1032
Score = 30.7 bits (66), Expect = 5.1
Identities = 19/97 (19%), Positives = 48/97 (49%)
Frame = +2
Query: 395 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 574
SQ + ++K++ EEL T+G V E+ L+++ A++ + + +Q +++ +
Sbjct: 439 SQLIEKLKQQMLDQEELLVSTRGDNEKVQRELSHLQSENDAAKDEVKEVLQALEELAVNY 498
Query: 575 VKNAKEKFSQLKSELHGLIYSMFPNTSALIIEFMGQL 685
+ ++E + KS+ + L+ A ++ +L
Sbjct: 499 DQKSQE--VEEKSQQNQLLVDELSQKVATMLSLESEL 533
>BC146670-1|AAI46671.1| 1032|Homo sapiens kinesin family member 5A
protein.
Length = 1032
Score = 30.7 bits (66), Expect = 5.1
Identities = 19/97 (19%), Positives = 48/97 (49%)
Frame = +2
Query: 395 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 574
SQ + ++K++ EEL T+G V E+ L+++ A++ + + +Q +++ +
Sbjct: 439 SQLIEKLKQQMLDQEELLVSTRGDNEKVQRELSHLQSENDAAKDEVKEVLQALEELAVNY 498
Query: 575 VKNAKEKFSQLKSELHGLIYSMFPNTSALIIEFMGQL 685
+ ++E + KS+ + L+ A ++ +L
Sbjct: 499 DQKSQE--VEEKSQQNQLLVDELSQKVATMLSLESEL 533
>BC113524-1|AAI13525.1| 578|Homo sapiens IFT74 protein protein.
Length = 578
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 398 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVS---S 568
Q + E K +EE K I+D ++EI ++ Q+T +E +++ I++ Q+
Sbjct: 268 QMIAEDKSIGSPMEEREKLLK-QIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLE 326
Query: 569 EHVKNAKEKFSQLK 610
EH +K+ +LK
Sbjct: 327 EHQGEMNQKYKELK 340
>BC023634-1|AAH23634.2| 383|Homo sapiens IFT74 protein protein.
Length = 383
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 398 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVS---S 568
Q + E K +EE K I+D ++EI ++ Q+T +E +++ I++ Q+
Sbjct: 170 QMIAEDKSIGSPMEEREKLLK-QIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLE 228
Query: 569 EHVKNAKEKFSQLK 610
EH +K+ +LK
Sbjct: 229 EHQGEMNQKYKELK 242
>BC023021-1|AAH23021.1| 731|Homo sapiens golgi autoantigen, golgin
subfamily a, 5 protein.
Length = 731
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +2
Query: 404 LNEIKEKTGQIEELTAFTKGS----IRDVDEEIMRLKNQI---TIAQEAMSKPIQKYGQV 562
L +K++ IEE TK + I+D DEEI +L+NQ+ T++ + S+ + Q+
Sbjct: 535 LERLKQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLSNSSQSELENRLHQL 594
Query: 563 SSEHVKNAKEKFSQLKSELHGLIYSM 640
+E + + L +E + L++ +
Sbjct: 595 -TETLIQKQTMLESLSTEKNSLVFQL 619
>AY644768-1|AAV85456.1| 731|Homo sapiens cell
proliferation-inducing gene 31 protein.
Length = 731
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +2
Query: 404 LNEIKEKTGQIEELTAFTKGS----IRDVDEEIMRLKNQI---TIAQEAMSKPIQKYGQV 562
L +K++ IEE TK + I+D DEEI +L+NQ+ T++ + S+ + Q+
Sbjct: 535 LERLKQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLSNSSQSELENRLHQL 594
Query: 563 SSEHVKNAKEKFSQLKSELHGLIYSM 640
+E + + L +E + L++ +
Sbjct: 595 -TETLIQKQTMLESLSTEKNSLVFQL 619
>AY040325-1|AAK77221.1| 600|Homo sapiens capillary morphogenesis
protein-1 protein.
Length = 600
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 398 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVS---S 568
Q + E K +EE K I+D ++EI ++ Q+T +E +++ I++ Q+
Sbjct: 290 QMIAEDKSIGSPMEEREKLLK-QIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLE 348
Query: 569 EHVKNAKEKFSQLK 610
EH +K+ +LK
Sbjct: 349 EHQGEMNQKYKELK 362
>AL356133-4|CAH72643.1| 600|Homo sapiens intraflagellar transport
74 homolog (Chlamydomonas) protein.
Length = 600
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 398 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVS---S 568
Q + E K +EE K I+D ++EI ++ Q+T +E +++ I++ Q+
Sbjct: 290 QMIAEDKSIGSPMEEREKLLK-QIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLE 348
Query: 569 EHVKNAKEKFSQLK 610
EH +K+ +LK
Sbjct: 349 EHQGEMNQKYKELK 362
>AK023707-1|BAB14650.1| 435|Homo sapiens protein ( Homo sapiens
cDNA FLJ13645 fis, clone PLACE1011310, weakly similar to
MYOSIN HEAVY CHAIN, GIZZARD SMOOTH MUSCLE. ).
Length = 435
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 398 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVS---S 568
Q + E K +EE K I+D ++EI ++ Q+T +E +++ I++ Q+
Sbjct: 125 QMIAEDKSIGSPMEEREKLLK-QIKDDNQEIASMERQLTDTKEKINQFIEEIRQLDMDLE 183
Query: 569 EHVKNAKEKFSQLK 610
EH +K+ +LK
Sbjct: 184 EHQGEMNQKYKELK 197
>AF085199-1|AAD09753.1| 731|Homo sapiens golgin-84 protein.
Length = 731
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +2
Query: 404 LNEIKEKTGQIEELTAFTKGS----IRDVDEEIMRLKNQI---TIAQEAMSKPIQKYGQV 562
L +K++ IEE TK + I+D DEEI +L+NQ+ T++ + S+ + Q+
Sbjct: 535 LERLKQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLSNSSQSELENRLHQL 594
Query: 563 SSEHVKNAKEKFSQLKSELHGLIYSM 640
+E + + L +E + L++ +
Sbjct: 595 -TETLIQKQTMLESLSTEKNSLVFQL 619
>AB210045-1|BAE06127.1| 1043|Homo sapiens KIF5A variant protein
protein.
Length = 1043
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/97 (19%), Positives = 48/97 (49%)
Frame = +2
Query: 395 SQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEH 574
SQ + ++K++ EEL T+G V E+ L+++ A++ + + +Q +++ +
Sbjct: 450 SQLIEKLKQQMLDQEELLVSTRGDNEKVQRELSHLQSENDAAKDEVKEVLQVLEELAVNY 509
Query: 575 VKNAKEKFSQLKSELHGLIYSMFPNTSALIIEFMGQL 685
+ ++E + KS+ + L+ A ++ +L
Sbjct: 510 DQKSQE--VEEKSQQNQLLVDELSQKVATMLSLESEL 544
>M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein.
Length = 793
Score = 29.9 bits (64), Expect = 8.9
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 407 NEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNA 586
N+ ++K + EE +GSI + E+M ++ + T +QE K GQ+SSE K
Sbjct: 183 NKKEDKEKEEEEEEKPKRGSIGENQVEVM-VEEKTTESQEETVVMSLKNGQISSEEPKQE 241
Query: 587 KEK 595
+E+
Sbjct: 242 EER 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,637,908
Number of Sequences: 237096
Number of extensions: 1370175
Number of successful extensions: 3639
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3622
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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