Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h08
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 33 0.25
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 30 1.3
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 30 1.3
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 30 1.3
Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical p... 30 1.8
U15304-1|AAA50369.1| 407|Caenorhabditis elegans PES-10 protein. 29 3.1
AL110485-21|CAB60370.1| 407|Caenorhabditis elegans Hypothetical... 29 3.1
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC084197-18|AAM44394.1| 546|Caenorhabditis elegans Hypothetical... 28 5.4
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical ... 27 9.5
AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical ... 27 9.5
>U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical
protein F32A6.1 protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +2
Query: 398 QFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHV 577
QF+ E++ ++ E + ++RD D+ I LKN++ I + +K G+ E +
Sbjct: 45 QFMAELERDNKRLVENVKELETTVRDCDDRIPELKNELAILLDDKNKMEGVSGENLEELL 104
Query: 578 KNAKEKFSQLKSEL 619
A EK ++ +E+
Sbjct: 105 SKAAEKEQRIDTEI 118
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 416 KEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEK 595
K KTG E+L + + DEE++ K + A SKPI +V+ E +K + K
Sbjct: 628 KRKTGNSEQLGSDNTSEASESDEEVIEPKIKKKEIVPAKSKPITP--EVADERIKEMERK 685
Query: 596 F 598
F
Sbjct: 686 F 686
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 416 KEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEK 595
K KTG E+L + + DEE++ K + A SKPI +V+ E +K + K
Sbjct: 628 KRKTGNSEQLGSDNTSEASESDEEVIEPKIKKKEIVPAKSKPITP--EVADERIKEMERK 685
Query: 596 F 598
F
Sbjct: 686 F 686
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 416 KEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEK 595
K KTG E+L + + DEE++ K + A SKPI +V+ E +K + K
Sbjct: 665 KRKTGNSEQLGSDNTSEASESDEEVIEPKIKKKEIVPAKSKPITP--EVADERIKEMERK 722
Query: 596 F 598
F
Sbjct: 723 F 723
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 467 IRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSELHG 625
+R+ EEI RLK+ + + P Q + E K +E+F + ++L G
Sbjct: 314 LREYQEEIARLKSMVQPGAVGVGAPAQDAFSIEEER-KKLREEFEEAMNDLRG 365
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 467 IRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSELHG 625
+R+ EEI RLK+ + + P Q + E K +E+F + ++L G
Sbjct: 342 LREYQEEIARLKSMVQPGAVGVGAPAQDAFSIEEER-KKLREEFEEAMNDLRG 393
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 467 IRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQLKSELHG 625
+R+ EEI RLK+ + + P Q + E K +E+F + ++L G
Sbjct: 314 LREYQEEIARLKSMVQPGAVGVGAPAQDAFSIEEER-KKLREEFEEAMNDLRG 365
>Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical
protein C30H6.5 protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 12 KIRIQTVEFRVNSQNFLIRQYAKEPRMFK 98
KI+ +TV + VN+QN ++ +YA+ R K
Sbjct: 118 KIKCKTVMYNVNTQNCVLSKYARHERTVK 146
>U15304-1|AAA50369.1| 407|Caenorhabditis elegans PES-10 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 386 LLTSQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMS 535
LL ++FL E + + E+ AF + + +VD+E++ + ++ E S
Sbjct: 162 LLRNEFLEEDEAEEQADNEMDAFEEEGVEEVDQEVVDFNDNESVISETES 211
>AL110485-21|CAB60370.1| 407|Caenorhabditis elegans Hypothetical
protein Y46G5A.27 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 386 LLTSQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMS 535
LL ++FL E + + E+ AF + + +VD+E++ + ++ E S
Sbjct: 162 LLRNEFLEEDEAEEQADNEMDAFEEEGVEEVDQEVVDFNDNESVISETES 211
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +2
Query: 470 RDVDEEIMRLKNQITIAQ------EAMSKPIQKYGQVSSEHVKNAKEKFSQLKSELHGLI 631
+D DEEI L N I + E+ +K ++ + +++KNAK+K + L+++L+
Sbjct: 233 QDHDEEINNLHNVIEELRNKLATVESKNKDLETKFSENQDYLKNAKDKVTFLENQLNSDA 292
Query: 632 YSMFPNTSALIIE 670
+ +T+ +E
Sbjct: 293 HEEVKSTAVRALE 305
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +2
Query: 470 RDVDEEIMRLKNQITIAQ------EAMSKPIQKYGQVSSEHVKNAKEKFSQLKSELHGLI 631
+D DEEI L N I + E+ +K ++ + +++KNAK+K + L+++L+
Sbjct: 233 QDHDEEINNLHNVIEELRNKLATVESKNKDLETKFSENQDYLKNAKDKVTFLENQLNSDA 292
Query: 632 YSMFPNTSALIIE 670
+ +T+ +E
Sbjct: 293 HEEVKSTAVRALE 305
>AC084197-18|AAM44394.1| 546|Caenorhabditis elegans Hypothetical
protein Y73B6BL.4 protein.
Length = 546
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 75 RIVVLKSFVNLP*IQPFVF 19
R+ ++ S VNLP IQP++F
Sbjct: 327 RLAIVSSIVNLPTIQPYIF 345
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/89 (23%), Positives = 38/89 (42%)
Frame = +2
Query: 389 LTSQFLNEIKEKTGQIEELTAFTKGSIRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSS 568
L+ L K Q E+ + + + V E +L + ++ A+ K ++S
Sbjct: 236 LSDDNLEYRKTMLSQKSEIDSLKAENFKLVSEN--QLNHDVSKNLAALQSEKLKLTEISQ 293
Query: 569 EHVKNAKEKFSQLKSELHGLIYSMFPNTS 655
+ + K+K LKSE H L + NT+
Sbjct: 294 QEISGLKKKIEVLKSENHRLSSQIQQNTN 322
>AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical
protein Y116F11B.11 protein.
Length = 511
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 467 IRDVDEEIMRLKNQITIAQEAMSKPIQKYGQVSSEHVKNAKEKFSQ--LKSELHGLIYSM 640
I D+ E I + ++ I + K ++ G+ S+ K + ++ LKS HGL+Y+
Sbjct: 19 IEDI-EYINNIVPELDIVNNCLKKLLELNGKTLSDVEKQEAMETAETMLKSAYHGLLYAG 77
Query: 641 FPNTSALIIEFM 676
F + + F+
Sbjct: 78 FKSEPITSVTFL 89
>AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical
protein Y39G8B.7 protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 215 IKTLQNNCLNVCNIIENAPPETPSANQDEISDKCLSY 325
I L+ C CN+ A TP +N + S C S+
Sbjct: 91 IPMLKKFCPETCNMCPGATTPTPDSNCKDCSPNCASW 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,549,119
Number of Sequences: 27780
Number of extensions: 255736
Number of successful extensions: 891
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -