Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30h08
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.51 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 73  YCRIKKFCEFTLNSTVCIRIFFSK 2
           YC I K CE + NST+ + +   K
Sbjct: 86  YCGIGKECELSPNSTIAVCVCMRK 109


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 251 NIIENAPPETPSANQDEISDKCLS 322
           N  +NA   TP    DE+ DK LS
Sbjct: 679 NTTQNASATTPPPQVDEVDDKELS 702


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 501 FNLIISSSTSRIEPF 457
           FN+IIS  T RI P+
Sbjct: 368 FNIIISEPTERISPY 382


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 386 LLTSQFLNEIKEKTGQIEELTAFTKGSIRDVD 481
           ++T+QFLN++K+ +  +       K  I D D
Sbjct: 420 IVTAQFLNQLKKSSVLVHTKNGRLKYQISDND 451


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 185 AETLDALKREIKTLQNNCLNVCNIIENAPPETPSANQDEISDKCLSYIQAL 337
           A T + LK  I+TLQ  C+      +    E  + N +   +   SY++ +
Sbjct: 16  AMTHEELKTGIQTLQPICVGETGTSQKIIDEVYNGNVNVEDENVQSYVECM 66


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 487 NYEVKKSNHYCTRSHVKTN 543
           N E  K+NH+C +   K N
Sbjct: 58  NKEKSKNNHHCNQDTEKLN 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,914
Number of Sequences: 438
Number of extensions: 3403
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)