Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h06
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 107 1e-23
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 105 4e-23
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 93 2e-19
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 79 4e-15
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 54 1e-07
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 47 1e-05
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 46 2e-05
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 44 1e-04
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 30 2.0
09_02_0420 + 9051728-9051754,9053244-9053530,9055263-9055500,905... 29 3.4
07_01_1128 - 10458441-10458524,10458898-10458965,10462736-104628... 29 4.5
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 29 4.5
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 28 6.0
04_04_1434 - 33568258-33569415 28 6.0
01_06_1799 + 39948481-39948607,39948694-39948762,39948859-399489... 28 6.0
07_01_0037 + 301864-302349 28 7.9
05_03_0340 + 12691974-12692155,12692248-12692312,12692816-126928... 28 7.9
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 107 bits (256), Expect = 1e-23
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 8/148 (5%)
Frame = +3
Query: 264 QATLPLLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS 443
+A ++++ MS VL EA + LNRPK LN+L+++M++ L +E+
Sbjct: 128 EAAKDIIKQAMSQ----VLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDG 183
Query: 444 --LVIIKGAGEKAFCAGGDVKAAIDKME------GPRFFHTEYNVNYLIGNYKIPYIAFI 599
L+I+KG G +AFCAGGDV A + + G FF E+ +NY+I Y P ++ +
Sbjct: 184 VKLLIVKGKG-RAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLL 242
Query: 600 NGITMGGGLGLSVHGRYRVATEKTLIAM 683
GI MGGG G+S+HGR+RV T+ T+ AM
Sbjct: 243 TGIVMGGGAGVSIHGRFRVVTDSTVFAM 270
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 105 bits (251), Expect = 4e-23
Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 8/131 (6%)
Frame = +3
Query: 315 VLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAGEKAFCAG 488
VL EA + +NRPK LN+L+++M++ L +E+ + L+I+KG G +AFCAG
Sbjct: 35 VLVEANGVTRTLLMNRPKQLNALSSAMITGFLRCFTAYEEDEGVKLLIVKGKG-RAFCAG 93
Query: 489 GDVKAAIDKMEGP------RFFHTEYNVNYLIGNYKIPYIAFINGITMGGGLGLSVHGRY 650
GDV A + + FF E+ +NY+I Y P ++ + GI MGGG G+S+HGR+
Sbjct: 94 GDVAAVVRSINNDSWKYSAHFFRNEFLLNYIIATYNKPQVSLLTGIVMGGGAGVSIHGRF 153
Query: 651 RVATEKTLIAM 683
RV TE T+ AM
Sbjct: 154 RVVTESTVFAM 164
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Frame = +3
Query: 312 DVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCA 485
+VL E +A LNRP LN+L T+M ++L WE + + V++KG+G +AFCA
Sbjct: 47 EVLVEGKASARAAVLNRPGHLNALTTTMGARLNKFYMSWEDNPDIGFVMMKGSG-RAFCA 105
Query: 486 GGDVKAAIDKM------EGPRFFHTEYNVNYLIGNYKIPYIAFINGITMGGGLGLSVHGR 647
GGDV + E FF T Y+ Y++G Y P++A ++G+TMGGG G+S+ G
Sbjct: 106 GGDVVRLHQLISEGKLDECKDFFKTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGT 165
Query: 648 YRVATEKTLIA 680
+R+ T++T+ A
Sbjct: 166 FRIVTDRTVFA 176
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 78.6 bits (185), Expect = 4e-15
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +3
Query: 276 PLLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LV 449
P ++ ++ + VL + A + LNRP+ LN ++ +V L L+ WEK + LV
Sbjct: 4 PEQQQQQANPDEVVLGQETGGARVAILNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLV 63
Query: 450 IIKGAGEKAFCAGGDVKAAIDKMEGPRFFHTEYNVNYL---IGNYKIPYIAFINGITMGG 620
I KGAG +AF AGGD+K + Y + +L I YK +A +NG+ MGG
Sbjct: 64 IFKGAG-RAFSAGGDLKMFYEGKSDDSCLEVVYRMYWLCYHIHTYKKTAVALVNGLVMGG 122
Query: 621 GLGLSVHGRYRVATEKTLIA 680
G + ++ V TEKT+ A
Sbjct: 123 GAAMVAPLKFAVVTEKTVFA 142
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 333 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVK 500
N ++TL+RPKALN++N M + L EWE + S+ V+++ + +AF AGGDVK
Sbjct: 17 NGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGGDVK 74
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = +3
Query: 294 MSSQEPDVLFEALN--NAGIVT--LNRPKALNSLNTSMVSKLLPQLQEW--EKSKSLVII 455
++ QEP V + L+ ++GIV L RP+A N++ M+ L +++ + + +V++
Sbjct: 36 LAQQEP-VRLQKLSAPDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLL 94
Query: 456 KGAGEKAFCAGGDVK--AAIDKMEGPRFFHTEYNVNYLIGNYKIPYIAFINGITMGGGLG 629
+ K FCAG D+K + E F ++ + IP IA + G GGGL
Sbjct: 95 ASSVPKVFCAGADLKERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVEGAAFGGGLE 154
Query: 630 LSVHGRYRVATEKTLIAM 683
L++ R+ E ++
Sbjct: 155 LALSCDLRICGENATFSL 172
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Frame = +3
Query: 312 DVLFEALNNAGI--VTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAF 479
D+L++ GI +T+NRP N+ V +L+ ++ S+ +I+ G G ++F
Sbjct: 70 DILYDKAVGEGIAKITINRPDRRNAFRPLTVKELMRAFEDARDDSSIGVIILTGKGTQSF 129
Query: 480 CAGGDVKAAIDKMEGPRFFHTEYNVNYL-----IGNYKIPYIAFINGITMGGG 623
C+GGD A+ +G F + +N L I P IA + G +GGG
Sbjct: 130 CSGGD--QALRDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGG 180
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 333 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVKAA 506
+ +VT+NRPKALN+L M+ L + + + V++ G G +AFC+G D+ AA
Sbjct: 21 SRVAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRG-RAFCSGVDLTAA 79
Query: 507 IDKMEG 524
+ +G
Sbjct: 80 EEVFKG 85
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +3
Query: 354 LNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVKAAIDKMEGP 527
L RP+ N++N + L +++ E ++ V++ + FCAG D+KA
Sbjct: 52 LERPEVKNAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKA-------- 103
Query: 528 RFFHTEYNVNYLIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATEKTLIAM 683
IP IA I G +GGGL L++ R+ E + +
Sbjct: 104 ---------------LSIPTIAVIEGAALGGGLELALSCDLRICGENATLGL 140
>09_02_0420 +
9051728-9051754,9053244-9053530,9055263-9055500,
9057010-9057204,9058075-9058339,9058520-9058827
Length = 439
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 395 GVKIITTTSRMGEIKVSGYN*GCWRESFLCWW*CES 502
G +I+TT V G GC R S+ WW E+
Sbjct: 75 GSRIVTTAGAPEPSHVDGVEDGCSRASYYRWWYAEN 110
>07_01_1128 -
10458441-10458524,10458898-10458965,10462736-10462864,
10462938-10463051,10463114-10463303,10463378-10463560
Length = 255
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 279 LLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS 443
++ R +E +L +ALN A I +NR N T+ + KL+P L E ++S
Sbjct: 36 VINRQKEDEEVCLLKKALNQA-IRIVNRIHLRNEAKTATLEKLVPHLGTLEATRS 89
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 526 GPSILSMAAFTSPPAQKAFSPAPLIITRDFDFSHS*SCGNNF 401
G S+++ A +PPA AF PAP I + + D+S + G+ F
Sbjct: 301 GKSVMTSATPPTPPAAPAFRPAPPIPSLN-DWSQPPARGSTF 341
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Frame = +3
Query: 345 IVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSLVIIKGAGEKAFCAGG-DVKA--AIDK 515
++T++ P +N+L+ ++ L +E + + I G+ +GG D+ AI +
Sbjct: 18 LITISNPP-VNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGGLDINTFGAIQR 76
Query: 516 MEGPRFFHTEYNVNYLIGNYKI---PYIAFINGITMGGGLGLSVHGRYRVA 659
+ + +++ + + P +A ING +GGGL +S+ + R++
Sbjct: 77 NKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQARIS 127
>04_04_1434 - 33568258-33569415
Length = 385
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 273 LPLLRRTMSSQEPDVLF-EALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSLV 449
L L TM ++ + L AL T+ R L S+ + LP+L EW K+ +
Sbjct: 267 LKLNEETMEWEKMESLDGRALFTGTYTTMMRKTKLKSMQNKV---FLPRLYEWPKTIHVD 323
Query: 450 IIKGAGEKAFCAGGDVKAAIDKM 518
++ GE AF + +I+K+
Sbjct: 324 LVIRDGEPAFIPKSHSQYSIEKI 346
>01_06_1799 +
39948481-39948607,39948694-39948762,39948859-39948965,
39949257-39949406
Length = 150
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +3
Query: 456 KGAGEKAFCAGGDVKAAIDKMEGPRFFHTEYNVNYLIGNYKIPYIAFINGITMGGGLGLS 635
+G G +F G D K+A+D M+G VN+ N + P G GGG G
Sbjct: 78 RGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNF--ANERPPGNRGGGGYGGGGG-GYG 134
Query: 636 VHGRY 650
G Y
Sbjct: 135 NQGGY 139
>07_01_0037 + 301864-302349
Length = 161
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 459 GAGEKAFCAGGDVKAAIDKMEG 524
G E +C GG V AA+D MEG
Sbjct: 82 GGKEGYWCGGGGVVAAVDGMEG 103
>05_03_0340 +
12691974-12692155,12692248-12692312,12692816-12692861,
12692959-12693057,12693722-12693755,12694489-12694618,
12694795-12694855,12695495-12695591,12696843-12697022,
12697120-12697233,12697283-12697396
Length = 373
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 558 YLIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATEKTLIAM 683
+L+ Y P++ + +GGG G+S+H +R+A+ L +
Sbjct: 48 HLLEAYLKPHLTLC--VNVGGGRGVSMHRTFRIASRNGLFLL 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,516,929
Number of Sequences: 37544
Number of extensions: 358262
Number of successful extensions: 999
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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