Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h04
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020856-1|AAH20856.1| 292|Homo sapiens Unknown (protein for IM... 31 3.1
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 30 7.1
BC107800-1|AAI07801.1| 458|Homo sapiens ARID5B protein protein. 30 9.4
BC086869-1|AAH86869.1| 954|Homo sapiens FLJ25770 protein protein. 30 9.4
BC066345-1|AAH66345.1| 213|Homo sapiens ARID5B protein protein. 30 9.4
BC015120-1|AAH15120.1| 217|Homo sapiens Unknown (protein for IM... 30 9.4
AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition f... 30 9.4
AL671972-1|CAH72685.1| 945|Homo sapiens modulator recognition f... 30 9.4
AK024803-1|BAB15012.1| 214|Homo sapiens protein ( Homo sapiens ... 30 9.4
>BC020856-1|AAH20856.1| 292|Homo sapiens Unknown (protein for
IMAGE:4288081) protein.
Length = 292
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 158 KGYKVKSMHYKR-KAALTSIPEDQENEDDNLHKKWVPKKK 274
KGY +K +HY++ K A S+ D +N N K KKK
Sbjct: 250 KGYVIKEIHYRKGKDASISLEPDLDNSGSNTVSKKKKKKK 289
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 30.3 bits (65), Expect = 7.1
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 194 KAALTSIPEDQENEDDNLHKKW---VPKKKHEVLKAKYKCLKKLFQIYDASVIGILPEAT 364
K A + ED+E ++ HK W +P+++ + ++ + + K+L +IY I +
Sbjct: 1022 KVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEER-QKELEEIYMLPRIRSSTKKA 1080
Query: 365 QEEETIRKKRSFRTKTDACAGTAETTNGDELIEADKESVATAVMRDL 505
Q ++ S R + A +ET + D+ + + +V +DL
Sbjct: 1081 QTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDL 1127
>BC107800-1|AAI07801.1| 458|Homo sapiens ARID5B protein protein.
Length = 458
Score = 29.9 bits (64), Expect = 9.4
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 RKKRSFRTKTDACAGTAETTNGDE--LIEADKESVATAVMRDLKMTQCSLVNFDSKSTIP 556
RKK+ + D+ +G ++ N + + K +A+ + C V+ + K +
Sbjct: 253 RKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKVA 312
Query: 557 KIDKCTTRSVDNIVLDKEYVPHTEEPLRAVPYL 655
++C +V +Y+ + P+ +PYL
Sbjct: 313 IGEECRADEQAFLVALYKYMKERKTPIERIPYL 345
>BC086869-1|AAH86869.1| 954|Homo sapiens FLJ25770 protein protein.
Length = 954
Score = 29.9 bits (64), Expect = 9.4
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 52 RKITNSVIGRYDIISK-FRNNR*LAILFRCQNCLFIKRIQSEIDALQT*SRSNQYS*GSR 228
R N++ Y+++ + FRN + + + +K QSE++ + +S + S G
Sbjct: 507 RSELNNLSEEYEVLKRNFRNKSEEMEMTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHA 566
Query: 229 ERRR*FAQKMGTEKK--T*SFKSQIQMLEEAIPNL*RQRH 342
+ QK T K+ + +S+IQ LEEA+ N +++H
Sbjct: 567 MKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKH 606
>BC066345-1|AAH66345.1| 213|Homo sapiens ARID5B protein protein.
Length = 213
Score = 29.9 bits (64), Expect = 9.4
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 RKKRSFRTKTDACAGTAETTNGDE--LIEADKESVATAVMRDLKMTQCSLVNFDSKSTIP 556
RKK+ + D+ +G ++ N + + K +A+ + C V+ + K +
Sbjct: 10 RKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKVA 69
Query: 557 KIDKCTTRSVDNIVLDKEYVPHTEEPLRAVPYL 655
++C +V +Y+ + P+ +PYL
Sbjct: 70 IGEECRADEQAFLVALYKYMKERKTPIERIPYL 102
>BC015120-1|AAH15120.1| 217|Homo sapiens Unknown (protein for
IMAGE:3681098) protein.
Length = 217
Score = 29.9 bits (64), Expect = 9.4
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 RKKRSFRTKTDACAGTAETTNGDE--LIEADKESVATAVMRDLKMTQCSLVNFDSKSTIP 556
RKK+ + D+ +G ++ N + + K +A+ + C V+ + K +
Sbjct: 10 RKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKVA 69
Query: 557 KIDKCTTRSVDNIVLDKEYVPHTEEPLRAVPYL 655
++C +V +Y+ + P+ +PYL
Sbjct: 70 IGEECRADEQAFLVALYKYMKERKTPIERIPYL 102
>AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition
factor 2 (MRF2) protein.
Length = 1188
Score = 29.9 bits (64), Expect = 9.4
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 RKKRSFRTKTDACAGTAETTNGDE--LIEADKESVATAVMRDLKMTQCSLVNFDSKSTIP 556
RKK+ + D+ +G ++ N + + K +A+ + C V+ + K +
Sbjct: 253 RKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKVA 312
Query: 557 KIDKCTTRSVDNIVLDKEYVPHTEEPLRAVPYL 655
++C +V +Y+ + P+ +PYL
Sbjct: 313 IGEECRADEQAFLVALYKYMKERKTPIERIPYL 345
>AL671972-1|CAH72685.1| 945|Homo sapiens modulator recognition
factor 2 (MRF2) protein.
Length = 945
Score = 29.9 bits (64), Expect = 9.4
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 RKKRSFRTKTDACAGTAETTNGDE--LIEADKESVATAVMRDLKMTQCSLVNFDSKSTIP 556
RKK+ + D+ +G ++ N + + K +A+ + C V+ + K +
Sbjct: 10 RKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKVA 69
Query: 557 KIDKCTTRSVDNIVLDKEYVPHTEEPLRAVPYL 655
++C +V +Y+ + P+ +PYL
Sbjct: 70 IGEECRADEQAFLVALYKYMKERKTPIERIPYL 102
>AK024803-1|BAB15012.1| 214|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21150 fis, clone CAS09561. ).
Length = 214
Score = 29.9 bits (64), Expect = 9.4
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 RKKRSFRTKTDACAGTAETTNGDE--LIEADKESVATAVMRDLKMTQCSLVNFDSKSTIP 556
RKK+ + D+ +G ++ N + + K +A+ + C V+ + K +
Sbjct: 10 RKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKVA 69
Query: 557 KIDKCTTRSVDNIVLDKEYVPHTEEPLRAVPYL 655
++C +V +Y+ + P+ +PYL
Sbjct: 70 IGEECRADEQAFLVALYKYMKERKTPIERIPYL 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,993,137
Number of Sequences: 237096
Number of extensions: 1790035
Number of successful extensions: 4863
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4855
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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