Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h04
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical pr... 31 0.61
U41274-3|AAD50511.2| 131|Caenorhabditis elegans Hypothetical pr... 31 0.61
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 0.81
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 0.81
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 30 1.9
>Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical
protein Y26G10.2 protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 647 AQHAVALLYAEHILYLERYYRRSESCIYRFWE*SIY 540
A + LL+ IL + YR+S++CI RF+E +Y
Sbjct: 111 ASSSCLLLFCNRILSILNMYRKSKTCIRRFFELILY 146
>U41274-3|AAD50511.2| 131|Caenorhabditis elegans Hypothetical
protein T04G9.7 protein.
Length = 131
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 110 IVSLLFYFVVKIVCSLKGYKVKSMHYKRKAALTSIPEDQENEDDNLHK-KWVPKKKHEVL 286
I+ +LF+ + + ++ + + ALT+ P +E+ED H+ +P KK EV+
Sbjct: 4 ILIVLFFVAAAVAFEARPSRIFKERVRSQQALTTTPSSEEHEDHESHEMPDMPVKKDEVM 63
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 31.1 bits (67), Expect = 0.81
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +2
Query: 158 KGYKVKSMHYKRKAALTSIPEDQENEDDNLHKKWVPKKKHEVLKAKYKCLKKLFQIYDAS 337
K K K K++A TS D++ + KK + KK +++ + K++ + S
Sbjct: 167 KSKKNKEKSVKKRAE-TSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKS 225
Query: 338 VIGILPEATQEEETIRKKRSFRTKTDACAG--TAETTNGDELIEADKESVATAVMRDLKM 511
+ E+ E+E KK++ + K + ++E+ DE E + S + L +
Sbjct: 226 KKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAV 285
Query: 512 TQCSLVNFDSKSTIPKIDKCTTRSVDNIVLDKE 610
+ S +S + + + R ++ D E
Sbjct: 286 KKLSSDEESEESDVEVLPQKKKRGAVTLISDSE 318
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/109 (22%), Positives = 48/109 (44%)
Frame = +2
Query: 173 KSMHYKRKAALTSIPEDQENEDDNLHKKWVPKKKHEVLKAKYKCLKKLFQIYDASVIGIL 352
KS RK A + D+ +E+++ K KK + K K K + D
Sbjct: 77 KSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDE------ 130
Query: 353 PEATQEEETIRKKRSFRTKTDACAGTAETTNGDELIEADKESVATAVMR 499
++ +E E KK+S +TK + ++E + + ++ K++ +V +
Sbjct: 131 -DSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKK 178
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 31.1 bits (67), Expect = 0.81
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Frame = +2
Query: 158 KGYKVKSMHYKRKAALTSIPEDQENEDDNLHKKWVPKKKHEVLKAKYKCLKKLFQIYDAS 337
K K K K++A TS D++ + KK + KK +++ + K++ + S
Sbjct: 167 KSKKNKEKSVKKRAE-TSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKS 225
Query: 338 VIGILPEATQEEETIRKKRSFRTKTDACAG--TAETTNGDELIEADKESVATAVMRDLKM 511
+ E+ E+E KK++ + K + ++E+ DE E + S + L +
Sbjct: 226 KKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAV 285
Query: 512 TQCSLVNFDSKSTIPKIDKCTTRSVDNIVLDKE 610
+ S +S + + + R ++ D E
Sbjct: 286 KKLSSDEESEESDVEVLPQKKKRGAVTLISDSE 318
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/109 (22%), Positives = 48/109 (44%)
Frame = +2
Query: 173 KSMHYKRKAALTSIPEDQENEDDNLHKKWVPKKKHEVLKAKYKCLKKLFQIYDASVIGIL 352
KS RK A + D+ +E+++ K KK + K K K + D
Sbjct: 77 KSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDE------ 130
Query: 353 PEATQEEETIRKKRSFRTKTDACAGTAETTNGDELIEADKESVATAVMR 499
++ +E E KK+S +TK + ++E + + ++ K++ +V +
Sbjct: 131 -DSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKK 178
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 KKWVPKKK-HEVLKAKYKCLKKLFQIYDASV-IGILPEATQEE-ETIRKKRSFRTKTDAC 421
+ WVP ++ AK K +K + + ASV I E TQ E E KKR C
Sbjct: 420 RMWVPDSMIGALIGAKGKNIKMIIRDTGASVKIEAPEEKTQREAEEAEKKRKLDETDSGC 479
Query: 422 AGTAETTNGDELIE 463
G A + E +E
Sbjct: 480 EGVASGDHPQEFLE 493
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 KKWVPKKK-HEVLKAKYKCLKKLFQIYDASV-IGILPEATQEE-ETIRKKRSFRTKTDAC 421
+ WVP ++ AK K +K + + ASV I E TQ E E KKR C
Sbjct: 544 RMWVPDSMIGALIGAKGKNIKMIIRDTGASVKIEAPEEKTQREAEEAEKKRKLDETDSGC 603
Query: 422 AGTAETTNGDELIE 463
G A + E +E
Sbjct: 604 EGVASGDHPQEFLE 617
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,532,821
Number of Sequences: 27780
Number of extensions: 322964
Number of successful extensions: 1180
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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