BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h04
(710 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.93
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.6
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.9
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 22 5.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.7
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 8.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.7
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.93
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ RS++P
Sbjct: 367 VPIYCGNFPPRSMEP 381
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 194 KAALTSIPEDQENEDDNLHKKWVPK 268
K L P DQE +DD + ++ P+
Sbjct: 680 KRELVDAPADQEGDDDQVDEREYPE 704
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 2.9
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 104 EIIVSLLFYFVVKIVCSLKGYKVKSMHYKRKAALTSIPEDQENEDDNLHKKWVPKKKH 277
EI+ SL + KI+ G K++S H +AAL SI + + ++ + +K+
Sbjct: 513 EILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKLERTEEQRIALRKY 570
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 2.9
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 104 EIIVSLLFYFVVKIVCSLKGYKVKSMHYKRKAALTSIPEDQENEDDNLHKKWVPKKKH 277
EI+ SL + KI+ G K++S H +AAL SI + + ++ + +K+
Sbjct: 551 EILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKLERTEEQRIALRKY 608
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 464 ADKESVATAVMRDLKMTQCSLVNFDSKSTIPKIDKCTTRSVDN 592
ADK++V T+ ++ + NF++ + I + + VDN
Sbjct: 23 ADKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDN 65
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R L P
Sbjct: 127 VPIYCGNFPPRPLGP 141
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R L P
Sbjct: 127 VPIYCGNFPPRPLGP 141
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R L P
Sbjct: 127 VPIYCGNFPPRPLGP 141
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R L P
Sbjct: 127 VPIYCGNFPPRPLGP 141
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPSRPMGP 139
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 128 VPIYCGNFPSRPMGP 142
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/31 (22%), Positives = 18/31 (58%)
Frame = +2
Query: 137 VKIVCSLKGYKVKSMHYKRKAALTSIPEDQE 229
+++ C + GY ++S+ ++R + I Q+
Sbjct: 508 LRVTCPVAGYPIESIVWERDTRVLPINRKQK 538
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 121 VPIYCGNFPPRPMGP 135
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 121 VPIYCGNFPPRPMGP 135
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 121 VPIYCGNFPPRPMGP 135
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 127 VPIYCGNFPPRPMGP 141
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 122 VPIYCGNFPPRPMGP 136
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 122 VPIYCGNFPPRPMGP 136
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 125 VPIYCGNFPPRPMGP 139
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 120 VPIYCGNFPPRPMGP 134
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 123 VPIYCGNFPPRPMGP 137
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 133 VPIYCGNFPPRPMGP 147
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 180 IDFTLYPFNEQTIL 139
ID T +PF++QT +
Sbjct: 153 IDVTYFPFDQQTCI 166
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 342 VPIYCGNFPPRPMGP 356
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 339 VPIYCGNFPPRPMGP 353
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 348 VPIYCGNFPPRPMGP 362
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 350 VPIYCGNFPPRPMGP 364
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 361 VPIYCGNFPPRPMGP 375
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 368 VPIYCGNFPPRPMGP 382
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 360 VPIYCGNFPPRPMGP 374
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 263 VPIFCANYRLRSLDP 219
VPI+C N+ R + P
Sbjct: 370 VPIYCGNFPPRPMGP 384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,619
Number of Sequences: 438
Number of extensions: 3863
Number of successful extensions: 65
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -