Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30h02
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0763 - 24405525-24405701,24406209-24406368,24406924-244070... 235 4e-62
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 86 2e-17
01_06_0553 + 30173964-30174349,30175124-30175439,30175523-301756... 76 3e-14
02_05_0511 + 29644266-29644399,29644502-29644913,29645007-296450... 56 3e-08
12_02_0962 + 24854731-24854830,24854966-24855076,24855332-248554... 32 0.56
12_02_0699 + 22245933-22246213,22246493-22246575,22246844-222471... 31 0.74
02_02_0467 - 10620976-10621299 30 1.7
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 3.9
04_04_0185 - 23403479-23403868,23404018-23404023 29 3.9
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 29 5.2
07_03_0402 - 17734494-17734550,17736775-17736819,17738333-177383... 28 6.9
07_03_0352 + 17089666-17089982,17090326-17090410,17090674-17090913 28 6.9
04_04_0427 + 25137036-25137119,25137687-25137826,25139775-251398... 28 6.9
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 6.9
02_02_0374 + 9538478-9540385 28 6.9
01_03_0197 + 13700225-13700278,13701178-13702422 28 6.9
01_06_0474 + 29604201-29604527,29604634-29604988,29605071-296054... 28 9.1
>06_03_0763 -
24405525-24405701,24406209-24406368,24406924-24407005,
24407098-24407167,24407443-24407607,24407731-24407874,
24408467-24408715,24409006-24409221,24409306-24409398
Length = 451
Score = 235 bits (574), Expect = 4e-62
Identities = 118/250 (47%), Positives = 167/250 (66%), Gaps = 1/250 (0%)
Frame = +1
Query: 1 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 180
+FSG+++ LAQ+I LG+DLGKV+ K+F++ E V++ ESVRG DV++VQ +N+
Sbjct: 92 IFSGTANRPLAQEIASYLGVDLGKVLIKRFADGEIYVQLQESVRGCDVFLVQPTCSPVNE 151
Query: 181 NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHII 360
NLMEL +MI+AC+ ASA +T VIP F YAR D+K + R ITAKL AN+L+ +G+D +I
Sbjct: 152 NLMELFVMIDACRRASARSITVVIPYFGYARADRKAQGREAITAKLSANLLTEAGSDRVI 211
Query: 361 TMDLHASQIQGFFDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRL 540
D+H++Q G+FDIPVD++ +P +L ++ K +VVSPD GG R + A +L
Sbjct: 212 VCDIHSTQALGYFDIPVDHIHGQPVILDYLASKTIS-KDLVVVSPDVGGVVRARAFAKKL 270
Query: 541 -NVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKV 717
+ A++ K R+ N M L+GDVK + AI+VDDM DT GTI AA L + GA V
Sbjct: 271 SDAPLAIVDKRRQGHNMSEVMHLIGDVKGKVAIMVDDMIDTAGTITSAAALLKQEGAEAV 330
Query: 718 YAILTHGIFS 747
YA TH +FS
Sbjct: 331 YACSTHAVFS 340
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/89 (48%), Positives = 60/89 (67%)
Frame = +1
Query: 163 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVS 342
S EI L L IN + ASA +TAVIP F YAR D+K + R I AKLVAN+++ +
Sbjct: 110 SQEIASYLGLELGKINIKRRASAKNITAVIPYFGYARADRKSQGRESIAAKLVANMITEA 169
Query: 343 GADHIITMDLHASQIQGFFDIPVDNLFAE 429
GA+ ++ DLH+SQ G+FDIPVD+++ +
Sbjct: 170 GANRVLVCDLHSSQAMGYFDIPVDHVYGQ 198
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 16/66 (24%)
Frame = +1
Query: 598 MVLVGDVKDRTAILVDDMADTC----------------GTICHAAEKLIEAGATKVYAIL 729
M L+GDV+ + A+++DDM DT GTI AE L + GA +VYA
Sbjct: 200 MNLIGDVRGKVAVMMDDMIDTADISLPNINILMKPIKLGTIAKGAELLHQEGAREVYACC 259
Query: 730 THGIFS 747
TH +FS
Sbjct: 260 THAVFS 265
Score = 35.1 bits (77), Expect = 0.060
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +1
Query: 1 VFSGSSHPDLAQKIVDRLGIDLGKVVTKK 87
+FSG+++P L+Q+I LG++LGK+ K+
Sbjct: 100 IFSGTANPSLSQEIASYLGLELGKINIKR 128
>01_06_0553 +
30173964-30174349,30175124-30175439,30175523-30175618,
30175710-30175778,30175878-30176006,30176165-30176264,
30177321-30177454
Length = 409
Score = 76.2 bits (179), Expect = 3e-14
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 9/249 (3%)
Frame = +1
Query: 25 DLAQKIVDRLG-IDLGKVVTKKFSN--METCVEIGESVRGEDVYIVQSGSGEINDNLMEL 195
+LA+++V R I+L + + F++ + ++RG+ V + S S + E
Sbjct: 109 ELAEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSP--SVIFEQ 166
Query: 196 LIMINACKIASASRVTAVIPCFPYAR----QDKKDKSRAPITAKLVANI-LSVSGADHII 360
L +I A S T ++P FP +D+ D + A A++++NI +S G ++
Sbjct: 167 LSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIPISRGGPSSLV 226
Query: 361 TMDLHASQIQGFFDIPVDNLFAEPA-VLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADR 537
D+HA Q + +F V F +LK + +PD + PD G KR
Sbjct: 227 IFDIHALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGAWKRFYKQLQH 286
Query: 538 LNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKV 717
+ + +K R+ + + GD + R ++VDD+ + GT+ + L E GA KV
Sbjct: 287 FPM--VVCNKVREGEQRIVR-IKEGDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKV 343
Query: 718 YAILTHGIF 744
A +THGIF
Sbjct: 344 SAYVTHGIF 352
>02_05_0511 +
29644266-29644399,29644502-29644913,29645007-29645075,
29645169-29645333,29645771-29645870,29645906-29646081
Length = 351
Score = 56.0 bits (129), Expect = 3e-08
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Frame = +1
Query: 127 VRGEDVYIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPI 306
+RG+ V + S S + E + +I A + T V+P FP ++ ++
Sbjct: 62 IRGQHVAFLASFSSP--SVIFEQISVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVA 119
Query: 307 TAKLVANILSV-----SGADHIITMDLHASQIQGFFDIPVDNLFAE--PAVLKWIKENIP 465
TA +A ILS+ G ++ D+HA Q + +F V F P +L+ +++ +P
Sbjct: 120 TAFTLARILSMIPKSRGGPTSVVIYDIHALQERFYFGDDVLPCFETGIPLLLQRLRQ-LP 178
Query: 466 DWKTSIVVSPDAGGAKRVTSIADRLNV---------EFALIHKERKKANEVASMVLVGDV 618
D + PD G KR + + ++ ++ + ++ ++ + G+
Sbjct: 179 DADNITIAFPDDGAWKRFHKLLLNFPMTPSFYFGLFDYKVVCAKVREGDKRIVRIKEGNP 238
Query: 619 KDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIF 744
+ R ++VDD+ + GT+ + L GA KV A +TH +F
Sbjct: 239 EGRHVVIVDDLVQSGGTLRECQKVLAAHGAAKVSAYVTHAVF 280
>12_02_0962 +
24854731-24854830,24854966-24855076,24855332-24855424,
24855538-24855687,24855934-24855992,24856081-24856134
Length = 188
Score = 31.9 bits (69), Expect = 0.56
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Frame = +1
Query: 478 SIVVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVASM------------VLVGDVK 621
++V +A G +IA + +F + K RK EV S + +G V+
Sbjct: 67 TLVAGIEARGFFFAPTIALEVGAKFVPLRKPRKLPGEVISEEYSLEYGTDKIEMQIGAVE 126
Query: 622 DRT-AILVDDMADTCGTICHAAEKLIEAGATKV 717
AI+VDD+ T GT+C A + L AGA V
Sbjct: 127 PNDRAIIVDDLIATGGTLCAAVKLLERAGAEVV 159
>12_02_0699 +
22245933-22246213,22246493-22246575,22246844-22247125,
22248725-22248986,22250146-22251781,22251910-22252416
Length = 1016
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 294 QSPDHGQTRCQHPFSVWSRSHHHYGS 371
Q PDH TRC++ VW R H + S
Sbjct: 12 QKPDHPPTRCRYQAKVWFRRHCFFQS 37
>02_02_0467 - 10620976-10621299
Length = 107
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 294 QSPDHGQTRCQHPFSVWSRSHHHYGS 371
Q PDH TRC+ VW R H + S
Sbjct: 12 QKPDHPPTRCRSQAKVWFRRHCFFQS 37
>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 276 RQKRQEQSPDHGQTRCQ-HPFSVWSRSHHHYGS 371
R+K++ +SP H + + HP +S+ HH +G+
Sbjct: 1554 RKKQKPESPPHAHPQGRNHPVKFFSKMHHMFGT 1586
>04_04_0185 - 23403479-23403868,23404018-23404023
Length = 131
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 577 KANEVASMVLVGDVKDRTAILVDDMADTCGTIC 675
KA+ V SM + GD +DR ++ D + TC C
Sbjct: 26 KADGVISMAITGDDRDRLEVVGDGVDVTCLVTC 58
>03_04_0140 + 17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 448 IKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHK--ERKKANEVASMVLVGDVK 621
+++ I D K + VSP G + + S+ N + + ++ NE+A +L GD K
Sbjct: 874 VQKRIADRKIKLEVSP--GAVEFLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGDFK 931
Query: 622 DRTAILVD 645
D +ILVD
Sbjct: 932 DEDSILVD 939
>07_03_0402 -
17734494-17734550,17736775-17736819,17738333-17738391,
17739128-17739277,17741868-17741960,17742589-17742598
Length = 137
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 631 AILVDDMADTCGTICHAAEKLIEAGATKV 717
A++VDD+ T GT+C A L AGA V
Sbjct: 64 ALVVDDLVATGGTLCAAIVLLERAGAEVV 92
>07_03_0352 + 17089666-17089982,17090326-17090410,17090674-17090913
Length = 213
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 258 LPVRAARQKRQEQSPDHGQTRCQHPFSVWSRSHHHYGS 371
LP + Q PDH RC+ VW R H + S
Sbjct: 12 LPKNLITRLGTPQKPDHPPIRCRSQAKVWFRRHCFFQS 49
>04_04_0427 +
25137036-25137119,25137687-25137826,25139775-25139846,
25141160-25141470,25141595-25141705,25143548-25143640,
25144063-25144212,25145062-25145120,25145636-25145693,
25146351-25146622
Length = 449
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 634 ILVDDMADTCGTICHAAEKLIEAGATKV 717
++VDD+ T GT+C A + L AGA V
Sbjct: 301 VVVDDLVATGGTLCAAIKLLERAGADVV 328
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 273 ARQKRQEQSPDHGQTRCQHPFSVWSR 350
+ Q ++++PD +T C+ P VWS+
Sbjct: 487 SEQNSEDENPDSSRTACETPKWVWSK 512
>02_02_0374 + 9538478-9540385
Length = 635
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 599 IEATSLAFF--LSLWIKANSTFKRSAIDVTLLAPPASGDTTMLV 474
IEA FF +S IKA +T +A L APP+S TT L+
Sbjct: 27 IEANRSKFFEEMSASIKATTTVLTAASHPPLQAPPSSTPTTCLM 70
>01_03_0197 + 13700225-13700278,13701178-13702422
Length = 432
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 598 MVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAIL 729
++LVG V D DD D +C+ AE L+ A + +A++
Sbjct: 240 VMLVGTVPDPAMASTDDQGDRSAKVCYFAE-LLNATLSVAFAVV 282
>01_06_0474 +
29604201-29604527,29604634-29604988,29605071-29605411,
29606502-29606940,29607558-29607913
Length = 605
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 293 AEPRSRPNSLPTSFQCLEPITSSLWIFMR 379
AEP SRPNS ++ C+ P S+ + R
Sbjct: 382 AEPPSRPNSFTSTSSCMAPSRRSMAVRSR 410
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,088,464
Number of Sequences: 37544
Number of extensions: 455610
Number of successful extensions: 1310
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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