Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30g15
(330 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces pom... 31 0.060
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 30 0.10
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 29 0.24
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 27 0.97
SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|c... 26 1.7
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 25 2.2
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 25 2.2
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 25 3.0
SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr 2|||M... 25 3.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 5.2
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 24 5.2
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 24 5.2
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 24 6.8
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 24 6.8
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 24 6.8
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 24 6.8
SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr 1|... 23 9.0
SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr... 23 9.0
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 23 9.0
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 23 9.0
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 23 9.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 23 9.0
SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease XPF... 23 9.0
>SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 30.7 bits (66), Expect = 0.060
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 142 SCRIMW-HLYFTQTCRMXRHFFFRLRSYCDNW 50
SC+ W ++YF + M +H R+ YCD +
Sbjct: 243 SCKFPWTYIYFVECLGMEKHLIDRVGKYCDTF 274
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 29.9 bits (64), Expect = 0.10
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 50 PVITVRTQPKKKVSXHAARLRKIEMPHNPTRGYVDPAS-VEQHMML 184
PV++ TQPK + A K+ M +P G + PA+ +E+HM L
Sbjct: 359 PVLSTTTQPKVQKPVPKAFQPKVPMEISPFSGELVPATELEEHMRL 404
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 28.7 bits (61), Expect = 0.24
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 194 ASLQASYAVQRKQDQHILLSDYVASLFYAD 105
A LQ + VQ + LL+DY++S+ YAD
Sbjct: 536 AFLQEDHIVQFQSISSALLTDYISSVLYAD 565
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 26.6 bits (56), Expect = 0.97
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 167 EQHMMLGEMRGTXNYKPPEAQRLKEKPGSAG 259
EQ+ ++ ++RG Y P + Q +KPGS+G
Sbjct: 225 EQNWIINDIRGVC-YNPLKQQWTLDKPGSSG 254
>SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 65 RTQPKKKVSXHAARLRKIEMPHNPTRGYVDPAS 163
R QP + HA+ RK P P G+ P S
Sbjct: 117 RRQPSSFLDVHASNTRKRGSPDTPDSGHSTPHS 149
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 2.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 50 PVITVRTQPKKKVSXHAARLRKIEMPHNPT 139
P TVR+ K+ S H++++ K +P +PT
Sbjct: 252 PQKTVRSIVKQTSSPHSSKMPKHSLPSSPT 281
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 2.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 177 ICCSTEAGSTYPLVGLCGISILXXXXXX*DTFFFGCVLTVITGMLSR 37
I C T GS LC + IL +T FF ++ ++ G+L+R
Sbjct: 519 IYCGTLNGSYCTAKNLCNLLILCKGFEGLET-FFAYIVHLLHGVLNR 564
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 25.0 bits (52), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +2
Query: 101 ARLRKIEMPHNPTRGYVDPASVEQHMMLGEMRGTXNYKPPEAQRLKE---KPGSAGYNNY 271
A RK E+P N +S + + + PP RL + KP S Y +
Sbjct: 11 APFRKQEVPQNQENQQKASSSFHESSLTSSTHSHPSNPPPPPTRLHDRSFKPVSKNYESE 70
Query: 272 GKNQP 286
G+ P
Sbjct: 71 GRLTP 75
>SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr
2|||Manual
Length = 116
Score = 24.6 bits (51), Expect = 3.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 314 YCPXLDNFF*VDFCHNYCSPPSLVSP 237
YCP DN F +D P + +SP
Sbjct: 66 YCPNCDNHFVIDAITKVEKPKAPISP 91
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.2 bits (50), Expect = 5.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 272 HNYCSPPSLVSPSNA 228
H+Y SPPS SPS+A
Sbjct: 302 HSYDSPPSPSSPSDA 316
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 24.2 bits (50), Expect = 5.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 226 CFRWLIVXSTAHLS 185
CF+W ++ AHLS
Sbjct: 143 CFKWFVLAHNAHLS 156
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 24.2 bits (50), Expect = 5.2
Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 159 LPLNSI*CLERCAVLXTISHRKHSV-*RRNQARRATIIMAKINLEKIIQTGTVC 317
LPL I C++R + + ++ +H+V + + ++ +++++ +IQT C
Sbjct: 12 LPLRVIYCIDRASAIRCLAKSQHAVPIQVLKEVEPKKVICQVDIQHVIQTVCRC 65
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 209 YKPPEAQRLKEKPGSAGYNNYGKN-QPRKNYPDXDSMYGA 325
YK PE E+ S+GY NY P + + + MY A
Sbjct: 192 YKRPELNITPEEVLSSGYGNYITTISPGEYFGELALMYNA 231
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 23.8 bits (49), Expect = 6.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 244 FLLQTLCFRWLIVXSTAHLSKHHMLFNGSRINI 146
F L WL V +T L K MLF+ + I I
Sbjct: 482 FQSTVLILSWLCVENTVTLKKIKMLFSEASIPI 514
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 23.8 bits (49), Expect = 6.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 254 PSLVSPSNAVLPVAYSX*YRASLQASYAVQRKQDQHILLSDYV 126
P+L SN + +S RA L+ Y ++ +L DYV
Sbjct: 332 PTLPKNSNLINEDEFSIANRARLEREYLQSDDAEEQEMLGDYV 374
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 23.8 bits (49), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 196 AHLSKHHMLF--NGSRINISSCRIMWHLYFTQT 104
A S H+ + NG+ + +SSC + + Y TQT
Sbjct: 136 AKASNKHVTYSPNGNFLAVSSCNGILYFYDTQT 168
>SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 23.4 bits (48), Expect = 9.0
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = -1
Query: 156 GSTYPLVGLCGISILXXXXXX*DTFFFGCVLTVITG 49
GST P +G + D F+ GC + G
Sbjct: 412 GSTVPPIGTSSFDYIGYSSEKFDLFYEGCAALGLNG 447
>SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 279
Score = 23.4 bits (48), Expect = 9.0
Identities = 16/81 (19%), Positives = 34/81 (41%)
Frame = +2
Query: 8 MTKVGEPQLALDNIPVITVRTQPKKKVSXHAARLRKIEMPHNPTRGYVDPASVEQHMMLG 187
M + + LD++ + V+ P+ + A ++ + + YVD A +E+ +
Sbjct: 164 MKRAARFNILLDDVSLTHVQFSPEFTAAVEAKQIAQQDAQR--ATFYVDRARMEKQGFIV 221
Query: 188 EMRGTXNYKPPEAQRLKEKPG 250
+G + +K KPG
Sbjct: 222 RAQGEGRAAQLIGEAIKNKPG 242
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 23.4 bits (48), Expect = 9.0
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = -3
Query: 238 LQTLCFRWLIVXSTAHLSKHHMLFNGSRINISSCRIMWHLYFTQTCRMXRHFFFRL 71
+Q+L FR+ ++ S HL+ + +G N+ + W L+ + +FF+ +
Sbjct: 413 VQSLVFRYPLLHSKIHLAISTLKDSGCDWNVGLSYLNW-LFVNKRITEAINFFYTI 467
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 23.4 bits (48), Expect = 9.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 166 NGSRINISSCRIMWHLYF 113
NGSR+ +++C I W F
Sbjct: 487 NGSRLIVANCHIHWDPQF 504
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 23.4 bits (48), Expect = 9.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 71 QPKKKVSXHAARLRKIEMPHNPTRGYV 151
+ KK S + A LRK E+P P G +
Sbjct: 878 ETKKNFSTYRALLRKAELPCVPFLGVI 904
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 263 NNYGKNQPRKNYPDXDSMYG 322
N KN +NY D S YG
Sbjct: 501 NELSKNANNENYDDDSSFYG 520
>SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease
XPF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 892
Score = 23.4 bits (48), Expect = 9.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 84 KCLXMRHVCVK*RCHIIRQEDM 149
+CL +RHV + R H++ E +
Sbjct: 176 RCLFLRHVFIYPRFHVVVAESL 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,347,486
Number of Sequences: 5004
Number of extensions: 24048
Number of successful extensions: 73
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 91899990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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