Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30g15
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF025457-15|AAB70961.1| 78|Caenorhabditis elegans Hypothetical... 27 4.2
AF025457-14|AAB70971.1| 78|Caenorhabditis elegans Hypothetical... 27 4.2
U28943-5|AAA68359.2| 435|Caenorhabditis elegans Hypothetical pr... 26 5.5
AF039712-2|AAK21401.1| 401|Caenorhabditis elegans Hypothetical ... 26 5.5
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 25 9.7
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 25 9.7
AL117193-16|CAJ76958.1| 76|Caenorhabditis elegans Hypothetical... 25 9.7
AL117193-15|CAB54992.2| 114|Caenorhabditis elegans Hypothetical... 25 9.7
AL117193-8|CAB54991.1| 76|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
protein R134.1 protein.
Length = 1140
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 32 LALDNIPVITVRTQPKKKVSXHAA-RLRKIEMPHNPTRGYVDPASVEQHMMLG 187
++L NIPV T T+PK KV AA + + + N G V P ++E+ G
Sbjct: 19 VSLQNIPVSTGTTRPKLKVGIAAAQKTQSASIGWNVCGGAV-PLAIERLKQAG 70
>AF025457-15|AAB70961.1| 78|Caenorhabditis elegans Hypothetical
protein C08E3.1 protein.
Length = 78
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 134 PTRGYVDPASVEQHMMLGEMRGTXNYKPPEAQRLKEKPGSAGYNNYG 274
PT P +V + M G + G N PP + + +PG+A NYG
Sbjct: 2 PTTPRSQPGTVGKDMA-GALAGRHNDMPPISSNYQGRPGNAN-PNYG 46
>AF025457-14|AAB70971.1| 78|Caenorhabditis elegans Hypothetical
protein C08E3.13 protein.
Length = 78
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 134 PTRGYVDPASVEQHMMLGEMRGTXNYKPPEAQRLKEKPGSAGYNNYG 274
PT P +V + M G + G N PP + + +PG+A NYG
Sbjct: 2 PTTPRSQPGTVGKDMA-GALAGRHNDMPPISSNYQGRPGNAN-PNYG 46
>U28943-5|AAA68359.2| 435|Caenorhabditis elegans Hypothetical
protein E04F6.6 protein.
Length = 435
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 119 EMPHNPTRGYVDPASVEQHMMLGEMRGTXNYKPPEA 226
+ P +P G D + ++Q ++RG +PP A
Sbjct: 161 QRPSSPFGGITDKSQIDQKAKAADVRGMIVNRPPSA 196
>AF039712-2|AAK21401.1| 401|Caenorhabditis elegans Hypothetical
protein F54D7.3 protein.
Length = 401
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 185 GEMRGTXNYKPPEAQRLKEKPGSAGYNNYGKN 280
G+ T + +PP L+ KP S+G + N
Sbjct: 362 GKTNNTLSPRPPRGHSLRHKPSSSGIDKRNHN 393
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 74 PKKKVSXHAARLRKIEMPHNPTRGYVDPASVEQHMML 184
P +KVS + + + +PT G +D +EQ+ ML
Sbjct: 159 PARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAML 195
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 74 PKKKVSXHAARLRKIEMPHNPTRGYVDPASVEQHMML 184
P +KVS + + + +PT G +D +EQ+ ML
Sbjct: 182 PARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAML 218
>AL117193-16|CAJ76958.1| 76|Caenorhabditis elegans Hypothetical
protein Y105C5A.13b protein.
Length = 76
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 134 PTRGYVDPASVEQHMMLGEMRGTXNYKPPEAQRLKEKPGSAGYN 265
PT P +V + M G + G N PP + + +PG+A N
Sbjct: 2 PTTPRSQPGTVGKDMA-GALAGRHNDMPPISSNYQGRPGNANPN 44
>AL117193-15|CAB54992.2| 114|Caenorhabditis elegans Hypothetical
protein Y105C5A.13a protein.
Length = 114
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 134 PTRGYVDPASVEQHMMLGEMRGTXNYKPPEAQRLKEKPGSAGYN 265
PT P +V + M G + G N PP + + +PG+A N
Sbjct: 40 PTTPRSQPGTVGKDMA-GALAGRHNDMPPISSNYQGRPGNANPN 82
>AL117193-8|CAB54991.1| 76|Caenorhabditis elegans Hypothetical
protein Y105C5A.12 protein.
Length = 76
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 134 PTRGYVDPASVEQHMMLGEMRGTXNYKPPEAQRLKEKPGSAGYN 265
PT P +V + M G + G N PP + + +PG+A N
Sbjct: 2 PTTPRSQPGTVGKDMA-GALAGRHNDMPPISSNYQGRPGNANPN 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,605,497
Number of Sequences: 27780
Number of extensions: 144220
Number of successful extensions: 365
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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