Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30g04
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical pr... 31 0.64
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.64
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.64
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.64
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.64
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.84
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.84
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 31 0.84
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 31 0.84
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 31 0.84
AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical ... 30 1.5
AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical ... 30 1.5
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 29 1.9
U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.4
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 28 4.5
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 28 4.5
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 5.9
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 28 5.9
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 5.9
L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical pr... 28 5.9
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 28 5.9
L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 28 5.9
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 28 5.9
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 28 5.9
U64598-4|AAN72420.1| 418|Caenorhabditis elegans Hypothetical pr... 27 7.9
U64598-3|AAK39213.1| 432|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 27 7.9
>Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical
protein T20F10.2b protein.
Length = 262
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +1
Query: 208 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVIN--K 381
+ L+KDGK++ DN K ++ + E ++ + IN+L + I +
Sbjct: 94 DTLEKDGKSNTDNYTKMQEELSALKEKAEELQRNNTALNSLVSTQAQLINQLNQTIGIIQ 153
Query: 382 MAAEQKKNVEELTTMLEK-QPPKVLDALQAGA 474
E+ KN L + K + PK A + A
Sbjct: 154 FEKEELKNAAHLNNLTPKIEKPKDKQAEEQNA 185
>Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical
protein T20F10.2a protein.
Length = 282
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +1
Query: 208 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVIN--K 381
+ L+KDGK++ DN K ++ + E ++ + IN+L + I +
Sbjct: 114 DTLEKDGKSNTDNYTKMQEELSALKEKAEELQRNNTALNSLVSTQAQLINQLNQTIGIIQ 173
Query: 382 MAAEQKKNVEELTTMLEK-QPPKVLDALQAGA 474
E+ KN L + K + PK A + A
Sbjct: 174 FEKEELKNAAHLNNLTPKIEKPKDKQAEEQNA 205
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +1
Query: 217 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQ 396
+K + + +K K + ++E AS K K E N++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 397 KKNVEELTTMLEKQPPKVLD 456
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +1
Query: 217 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQ 396
+K + + +K K + ++E AS K K E N++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 397 KKNVEELTTMLEKQPPKVLD 456
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +1
Query: 217 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQ 396
+K + + +K K + ++E AS K K E N++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 397 KKNVEELTTMLEKQPPKVLD 456
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +1
Query: 217 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQ 396
+K + + +K K + ++E AS K K E N++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 397 KKNVEELTTMLEKQPPKVLD 456
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 220 KDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQK 399
K V+ + M + K+ E K ++ A K E V + ++INK K+++ A+ K
Sbjct: 911 KGSTREVEERMTAMNEQKVALEGKLAD--ASKKLE-VEEARAVEINKQKKLVEAECADLK 967
Query: 400 KNVEELTTMLEK 435
KN +++ L K
Sbjct: 968 KNCQDVDLSLRK 979
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 220 KDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQK 399
K V+ + M + K+ E K ++ A K E V + ++INK K+++ A+ K
Sbjct: 911 KGSTREVEERMTAMNEQKVALEGKLAD--ASKKLE-VEEARAVEINKQKKLVEAECADLK 967
Query: 400 KNVEELTTMLEK 435
KN +++ L K
Sbjct: 968 KNCQDVDLSLRK 979
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 220 KDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQK 399
K V+ + M + K+ E K ++ A K E V + ++INK K+++ A+ K
Sbjct: 911 KGSTREVEERMTAMNEQKVALEGKLAD--ASKKLE-VEEARAVEINKQKKLVEAECADLK 967
Query: 400 KNVEELTTMLEK 435
KN +++ L K
Sbjct: 968 KNCQDVDLSLRK 979
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 KLQKDGKNSVDNIIKWM-KDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMA 387
K QK+ K + ++ + +D+K ++ KA++EK + + ++ + ++ I K
Sbjct: 499 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 558
Query: 388 AEQKKNVEELTTMLEKQ 438
+++++ V ELTT+ K+
Sbjct: 559 SQREQKVAELTTLERKE 575
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 KLQKDGKNSVDNIIKWM-KDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMA 387
K QK+ K + ++ + +D+K ++ KA++EK + + ++ + ++ I K
Sbjct: 499 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 558
Query: 388 AEQKKNVEELTTMLEKQ 438
+++++ V ELTT+ K+
Sbjct: 559 SQREQKVAELTTLERKE 575
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 KLQKDGKNSVDNIIKWM-KDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMA 387
K QK+ K + ++ + +D+K ++ KA++EK + + ++ + ++ I K
Sbjct: 544 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 603
Query: 388 AEQKKNVEELTTMLEKQ 438
+++++ V ELTT+ K+
Sbjct: 604 SQREQKVAELTTLERKE 620
>AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical
protein Y14H12B.1b protein.
Length = 217
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 253 KWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLE 432
K M S+ + KA +EK + E P+ + D + +E+ N+M E+K+ + + ++E
Sbjct: 66 KEMVASRKSTQKKAKKEKTPEK-EATPEPESPDDSGSEEIDNEMMEEEKQEYKFVYNIVE 124
Query: 433 KQPP 444
+ PP
Sbjct: 125 RVPP 128
>AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical
protein Y14H12B.1a protein.
Length = 250
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 253 KWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLE 432
K M S+ + KA +EK + E P+ + D + +E+ N+M E+K+ + + ++E
Sbjct: 99 KEMVASRKSTQKKAKKEKTPEK-EATPEPESPDDSGSEEIDNEMMEEEKQEYKFVYNIVE 157
Query: 433 KQPP 444
+ PP
Sbjct: 158 RVPP 161
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 196 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKE-- 369
D E+ + D + N+ + KD + + K E+ RK E + D K KE
Sbjct: 1034 DADIERAEADEQRRKMNVERAKKDEERAKKDKRDAEERRKKDEERAKKDKEDAKKAKEDQ 1093
Query: 370 -VINKMAAEQKKNVEELTTMLEKQ 438
I+K+AAE K+ E+ EK+
Sbjct: 1094 EKIDKLAAEVKEREEKSLARHEKE 1117
>U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical
protein F32A6.1 protein.
Length = 156
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +1
Query: 196 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVI 375
DQF +L++D K V+N VK E R + +P++ N ++ L +
Sbjct: 44 DQFMAELERDNKRLVEN-------------VKELETTVRDCDDRIPELKN-ELAILLDDK 89
Query: 376 NKMAAEQKKNVEELTTMLEKQPPKV 450
NKM +N+EEL + ++ ++
Sbjct: 90 NKMEGVSGENLEELLSKAAEKEQRI 114
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 196 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVI 375
D+ EKLQKDG + K K + K ++K +++F V +N N + V+
Sbjct: 462 DEEIEKLQKDGNRLKSTLQTLEKRVKQLRTEKERDDKEKEMFAKVA-MNRKTSNPVPPVL 520
Query: 376 NK 381
N+
Sbjct: 521 NQ 522
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 196 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVI 375
D+ EKLQKDG + K K + K ++K +++F V +N N + V+
Sbjct: 462 DEEIEKLQKDGNRLKSTLQTLEKRVKQLRTEKERDDKEKEMFAKVA-MNRKTSNPVPPVL 520
Query: 376 NK 381
N+
Sbjct: 521 NQ 522
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 352 INKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 480
+ +EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1197 VKSSEEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 352 INKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 480
+ +EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1197 VKSSEEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 292 ASEEKARKLFEGVPDINNIDIN-KLKEVINKMAAEQKKNVEELTTMLEKQPPK 447
+++ +A +LF + N+++ + ++++ K E ++ V E+ T+ ++QPPK
Sbjct: 341 SAKNEATRLFANKKNNNDVEKSTQIEKKPEKQGPEIQEEVVEMETVKDEQPPK 393
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +1
Query: 352 INKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 480
+ +EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1197 VKSSEEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical
protein F44E2.7b protein.
Length = 379
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 286 VKASEEKARKLFEGVPDINNIDINKLKEVINK-----MAAEQKKNVEELTTMLEKQPPKV 450
V A+ EK RKL E + + ++ K + E+K+ E+L L+ Q K
Sbjct: 38 VAAAAEKHRKLLEEQRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKT 97
Query: 451 LDALQAGASAFKAALEKK 504
A Q +A KAA+ ++
Sbjct: 98 AAAAQIRETAEKAAVARR 115
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 286 VKASEEKARKLFEGVPDINNIDINKLKEVINK-----MAAEQKKNVEELTTMLEKQPPKV 450
V A+ EK RKL E + + ++ K + E+K+ E+L L+ Q K
Sbjct: 70 VAAAAEKHRKLLEEQRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKT 129
Query: 451 LDALQAGASAFKAALEKK 504
A Q +A KAA+ ++
Sbjct: 130 AAAAQIRETAEKAAVARR 147
>L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical
protein F44E2.7a protein.
Length = 471
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 286 VKASEEKARKLFEGVPDINNIDINKLKEVINK-----MAAEQKKNVEELTTMLEKQPPKV 450
V A+ EK RKL E + + ++ K + E+K+ E+L L+ Q K
Sbjct: 130 VAAAAEKHRKLLEEQRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKT 189
Query: 451 LDALQAGASAFKAALEKK 504
A Q +A KAA+ ++
Sbjct: 190 AAAAQIRETAEKAAVARR 207
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 286 VKASEEKARKLFEGVPDINNIDINKLKEVINK-----MAAEQKKNVEELTTMLEKQPPKV 450
V A+ EK RKL E + + ++ K + E+K+ E+L L+ Q K
Sbjct: 128 VAAAAEKHRKLLEEQRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKT 187
Query: 451 LDALQAGASAFKAALEKK 504
A Q +A KAA+ ++
Sbjct: 188 AAAAQIRETAEKAAVARR 205
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 229 KNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKN 405
KN+ ++KW + + + + + L EG+ D N+I ++K E+ + +N
Sbjct: 464 KNNTAQLVKWFSNFREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRN 522
>U64598-4|AAN72420.1| 418|Caenorhabditis elegans Hypothetical
protein C52B9.3b protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 346 IDINKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQ 465
ID+ KE + K+ E+K+ +E+T LE P VLD ++
Sbjct: 312 IDLTPKKEAVVKILCEEKEVNQEITISLE---PTVLDFMK 348
>U64598-3|AAK39213.1| 432|Caenorhabditis elegans Hypothetical
protein C52B9.3a protein.
Length = 432
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 346 IDINKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQ 465
ID+ KE + K+ E+K+ +E+T LE P VLD ++
Sbjct: 326 IDLTPKKEAVVKILCEEKEVNQEITISLE---PTVLDFMK 362
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 277 IDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEK 435
+ E ++S++ ++ +GVP I IDI K K E+ K+ EELT L +
Sbjct: 163 VKEEESSQKMSKSKEKGVP-IPKIDIEIEKASPKKEKKEKVKSPEELTRRLNE 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,703,737
Number of Sequences: 27780
Number of extensions: 206838
Number of successful extensions: 894
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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