Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30g02
         (327 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0202 - 26339467-26339494,26339579-26339624,26339742-263397...    26   8.0  

>05_06_0202 -
           26339467-26339494,26339579-26339624,26339742-26339785,
           26340729-26340851,26341010-26341124,26341447-26342207,
           26342305-26342711,26342798-26342900,26344642-26345144
          Length = 709

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 306 LFTQNITIALNTDGCHRRH-PRRYVSEFN 223
           L +Q IT ALN +   R+H PRRY SE N
Sbjct: 679 LKSQEITEALNDELSQRQHKPRRY-SEMN 706


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,460,800
Number of Sequences: 37544
Number of extensions: 61580
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)