Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f24
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical pr...    33   0.18 
U53336-7|AAA96179.1|  642|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical...    29   2.2  
AL034489-4|CAA22466.1|  130|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF038608-11|AAC25815.1|  319|Caenorhabditis elegans Serpentine r...    28   5.0  
AC025716-18|AAT81178.1|  998|Caenorhabditis elegans Hypothetical...    28   5.0  

>Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical
           protein C26D10.4 protein.
          Length = 839

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 18/75 (24%), Positives = 37/75 (49%)
 Frame = +2

Query: 188 ESKFDEIKIGIVNKIDKELIDSQNARLFIIQKYDELCNKINFLTELDSTFNGFRRDVKSI 367
           E +F + K+GI  K+ + + D  NAR  I +K+ +   ++  L  ++  +  F    ++ 
Sbjct: 260 EEEFIKNKLGIHEKVSENVQDRTNARKQIFKKFQDFKGRVEVLDIIEYQYKKFPEHSRNY 319

Query: 368 EQQVCELSQRVDSIE 412
            Q +   S  ++S E
Sbjct: 320 RQLLDIFSGELNSNE 334


>U53336-7|AAA96179.1|  642|Caenorhabditis elegans Hypothetical
           protein K07C11.9 protein.
          Length = 642

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 227 KIDKELIDSQNARLFIIQKYDELCNKIN-FLTELDSTFNGFRRDVKSIEQQVCELSQRVD 403
           +++KE +        I+QK+DELC K+N   T L       +     + Q+   L ++  
Sbjct: 66  RLNKEYLSEFEKINNIVQKFDELCVKMNSTCTNLSKQMETVKFKSVDLVQKTASLKEKKA 125

Query: 404 SIEKR 418
           SIE R
Sbjct: 126 SIESR 130


>Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical
           protein F34D10.3 protein.
          Length = 147

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 183 VVFERLLVLLLTFNISLSATLFVIDILMFCCIV 85
           VVFE L+ + LTF +S+   ++ I   +FC I+
Sbjct: 97  VVFEVLIAIRLTFALSIPYIVYFIPFWIFCGII 129


>AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical
           protein Y111B2A.4 protein.
          Length = 459

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 308 NFLTELDSTFNGFRRDVKSIEQQVCELSQRVDSIEKRII 424
           N  TEL+  F GF+    + +    +L++R+DS++  +I
Sbjct: 304 NAYTELNEEFEGFKEQHTATQNANNDLNRRIDSLKANLI 342


>AL034489-4|CAA22466.1|  130|Caenorhabditis elegans Hypothetical
           protein Y7A5A.6 protein.
          Length = 130

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +3

Query: 171 SQTRLLNRNSTR*KSESLIKSIKN*SILKTLDCLSFKSTMSFVTRLI 311
           S T +++R++ R  + +L+K      +L   + +SF ST S + R++
Sbjct: 60  SSTEMVSRSNKRVSASTLVKEPWKAFVLPLFEVISFNSTFSRILRIL 106


>AF038608-11|AAC25815.1|  319|Caenorhabditis elegans Serpentine
           receptor, class z protein79 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 208 YLVEFRFNSRV*EVTRIIINL*HFLVCYFVCYRHFNVLLYCNETIL 71
           Y+  F+ N R    T +   + HF     + Y  F +L++CN  IL
Sbjct: 42  YVYVFKLNRRRDRKTLLFPTVSHFYGMVKITYCMFGILIFCNIMIL 87


>AC025716-18|AAT81178.1|  998|Caenorhabditis elegans Hypothetical
            protein Y39G10AR.3 protein.
          Length = 998

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/59 (23%), Positives = 33/59 (55%)
 Frame = +2

Query: 239  ELIDSQNARLFIIQKYDELCNKINFLTELDSTFNGFRRDVKSIEQQVCELSQRVDSIEK 415
            +++D+   +  ++++ ++L +KI    E D+TF G R  +  +E ++ EL  +   + K
Sbjct: 912  KIMDATAKQNSLLREIEDLKSKIK---EQDTTFEGHRNQMSDLESKLQELQAKQSFLRK 967


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,567,557
Number of Sequences: 27780
Number of extensions: 156687
Number of successful extensions: 511
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)