Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f20
         (501 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0528 - 22976627-22976833,22976944-22976992,22977052-229770...    29   2.8  

>01_05_0528 -
           22976627-22976833,22976944-22976992,22977052-22977077,
           22977201-22977276,22977432-22977529,22977986-22978066,
           22978244-22978315,22978468-22978498,22978513-22979246
          Length = 457

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 326 VAGT-RKGLLHISH*YFNEIVQVNSLLKFSAKRLRYTLLAS 207
           +AGT R GLLHIS+     ++ V+ +LK   +   Y++  S
Sbjct: 333 IAGTNRSGLLHISNISRGRVLSVSDILKIDEEFTEYSVTLS 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,119,096
Number of Sequences: 37544
Number of extensions: 145121
Number of successful extensions: 257
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)