Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f20
         (501 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    29   1.9  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     29   1.9  
Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical pr...    28   3.3  

>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 264 LNYFIKISMAYVKEAFSSACNIWEAIHNDPFNWNLFKSLTF 386
           L YF +  + ++K+  S+  N  E   +D   WNL+ +L +
Sbjct: 39  LRYFQQTLIGFLKDFPSTQTNYCERFSSDAARWNLYPNLNY 79


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 264 LNYFIKISMAYVKEAFSSACNIWEAIHNDPFNWNLFKSLTF 386
           L YF +  + ++K+  S+  N  E   +D   WNL+ +L +
Sbjct: 39  LRYFQQTLIGFLKDFPSTQTNYCERFSSDAARWNLYPNLNY 79


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 264 LNYFIKISMAYVKEAFSSACNIWEAIHNDPFNWNLFKSLTF 386
           L YF +  + ++K+  S+  N  E   +D   WNL+ +L +
Sbjct: 39  LRYFQQTLIGFLKDFPSTQTNYCERFSSDAARWNLYPNLNY 79


>Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical
           protein C08F8.9 protein.
          Length = 55

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 327 IWEAIHNDPFNWNLFKSLTFFFLGL 401
           I   ++NDPF W++FK +  F +G+
Sbjct: 17  IVNTVYNDPFFWSVFKGVIGFGVGV 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,431,543
Number of Sequences: 27780
Number of extensions: 144035
Number of successful extensions: 302
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)