Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f19
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   2.7  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        24   3.5  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    24   4.7  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    24   4.7  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 545 LRRYRLYSCCSDTHPD 592
           +R  + YSCC + +PD
Sbjct: 213 VRNEKFYSCCEEPYPD 228


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 342 QNFSVR-IHQLHLLKWIHKHVN 404
           Q  S R I+ LH + W++KH N
Sbjct: 65  QMISARAINALHHIDWVYKHTN 86


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 450 HRVYRMSFGCVRSTESTNSPCCTSICCTSKIG 545
           +R +R +F  V S      P C   CC S  G
Sbjct: 527 NRRFRQAFLGVFSCYRNRMPICCCFCCASSNG 558


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 435 QEYLTHRVYRMSFGCVRSTE 494
           + YLT+R YR+   C+ S E
Sbjct: 102 ESYLTNRRYRVKVDCMTSRE 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,706
Number of Sequences: 2352
Number of extensions: 13728
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)