Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f19
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like pr...    30   1.6  
U40028-4|AAA81115.1|  758|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF036693-4|AAK29786.1|  360|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like
           protein family protein11 protein.
          Length = 394

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +3

Query: 207 ILNVAQDDQPRVPPEVSNLQPV*SGRNSFYLCSFHVPPHYFIASLQNFSVRIHQL 371
           I ++   D+ R PP V  L+     + SF LC+ ++PP +F  SL  F +++  L
Sbjct: 47  IPDLLNPDKKRNPPSVGQLK-----KTSFPLCNVNLPPIFFTISL--FRIKLPNL 94


>U40028-4|AAA81115.1|  758|Caenorhabditis elegans Hypothetical
           protein T05A7.6 protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 282 RNSFYLCSFHVPPHYFIASLQNFSVRIHQLHLLKWIHKHVNPAGHLHNVTKQEYLTHRVY 461
           R  + L SF     + +A +Q  +  +  LH L ++H+ + PA +   + ++E     VY
Sbjct: 536 RRKYLLASFSKHTSFNVA-IQTVTA-LRDLHSLGYLHRDIKPANYAVGLDERE---DTVY 590

Query: 462 RMSFGCVR 485
            + FG  +
Sbjct: 591 MLDFGIAK 598


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 444 LTHRVYRMSFGCVRSTESTNSPCCTSICCTSK 539
           L  R  R S GC       N  CC+S CC+S+
Sbjct: 33  LETRRKRCSCGCSGCDLFPNRSCCSSSCCSSQ 64


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
            ZC84.1 protein.
          Length = 1556

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 465  MSFGCVRSTESTNSPCCTS 521
            + FGCV+S+ S N  CC S
Sbjct: 1466 VGFGCVQSSTSNNHICCPS 1484


>AF036693-4|AAK29786.1|  360|Caenorhabditis elegans Hypothetical
           protein C49A9.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 354 VRIHQLHLLKWIHKHVNPAGHLHNVTKQEY 443
           +RI  + L  ++H +V+PAG L+N  K ++
Sbjct: 40  LRISGIQLGDFVHVNVDPAGRLYNFCKTKH 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,937,829
Number of Sequences: 27780
Number of extensions: 321081
Number of successful extensions: 870
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)