Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f18
         (380 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D577B8 Cluster: PREDICTED: similar to WD and tet...    31   5.5  
UniRef50_A7F6P0 Cluster: Putative uncharacterized protein; n=1; ...    31   9.6  

>UniRef50_UPI0000D577B8 Cluster: PREDICTED: similar to WD and
           tetratricopeptide repeats 1; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to WD and
           tetratricopeptide repeats 1 - Tribolium castaneum
          Length = 608

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +2

Query: 2   IAVRVSFTCQAWLIRFYNMQLHIRGQSTHVLDVNGQESIGQIKIERNYPFR 154
           +++++S T  A+      M ++I G+  ++ DVN    I ++KI +N P R
Sbjct: 267 MSIKLSVTYIAFNSAGSEMLVNIGGEQIYLFDVNNSRHINELKIPQNLPKR 317


>UniRef50_A7F6P0 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 514

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -1

Query: 281 QTSEATKTSVSTVRCIINEAKGSGLLIVLGTPGKKRSGKKKVTGMDSFV--QS*SDQWTP 108
           +TSE ++TS+ST +    + K   L+  LG       GK + TG+ +++  +S S  WT 
Sbjct: 430 ETSETSETSISTPKTPSFQYKQKDLIAYLGRGDGVIQGKTEWTGVSAWLAWRSGSIAWTR 489

Query: 107 G 105
           G
Sbjct: 490 G 490


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,050,653
Number of Sequences: 1657284
Number of extensions: 5799801
Number of successful extensions: 14053
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14051
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)