Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f18
         (380 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,...    29   2.7  
AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,...    29   2.7  
AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,...    29   2.7  
AY061092-1|AAL28640.1|  380|Drosophila melanogaster LD07994p pro...    28   4.7  
AE013599-725|AAF59034.1|  380|Drosophila melanogaster CG8269-PA ...    28   4.7  

>AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,
            isoform B protein.
          Length = 1314

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 166  FPDLFLPGVP-STMSKPEPLASLIMHLTVLT 255
            F  + +  VP S++    PLASL++HLTV+T
Sbjct: 1081 FDGMLVEQVPLSSLISSTPLASLLLHLTVVT 1111


>AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,
            isoform A protein.
          Length = 1314

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 166  FPDLFLPGVP-STMSKPEPLASLIMHLTVLT 255
            F  + +  VP S++    PLASL++HLTV+T
Sbjct: 1081 FDGMLVEQVPLSSLISSTPLASLLLHLTVVT 1111


>AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,
            isoform G protein.
          Length = 1388

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 166  FPDLFLPGVP-STMSKPEPLASLIMHLTVLT 255
            F  + +  VP S++    PLASL++HLTV+T
Sbjct: 1155 FDGMLVEQVPLSSLISSTPLASLLLHLTVVT 1185


>AY061092-1|AAL28640.1|  380|Drosophila melanogaster LD07994p
           protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -1

Query: 284 KQTSEATKTSVSTVRCIINEAKGSGLLIVLGTPGKKRSGKKKVTGMDSFVQS 129
           KQ+ +A  T +ST R ++   K   +L    TPG K+  K  ++ ++ F QS
Sbjct: 131 KQSYDAVATVISTARKVLESLKLEQVLGKEQTPGSKQV-KALISQVEEFKQS 181


>AE013599-725|AAF59034.1|  380|Drosophila melanogaster CG8269-PA
           protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -1

Query: 284 KQTSEATKTSVSTVRCIINEAKGSGLLIVLGTPGKKRSGKKKVTGMDSFVQS 129
           KQ+ +A  T +ST R ++   K   +L    TPG K+  K  ++ ++ F QS
Sbjct: 131 KQSYDAVATVISTARKVLESLKLEQVLGKEQTPGSKQV-KALISQVEEFKQS 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,474,154
Number of Sequences: 53049
Number of extensions: 260083
Number of successful extensions: 597
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)