Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f16
         (369 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   4.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   7.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 89  VYVWRKPKKINTMKIIWL 142
           ++VW   +KI+ ++  WL
Sbjct: 291 IHVWTSKEKISFLRGFWL 308


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 367 FFLSFLCLFYLIH 329
           FF SF C+ + I+
Sbjct: 11  FFFSFCCILFFIY 23


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 201 FHNVSKPEPQYLNQCLNHTEMR 266
           FHNV+    Q L   LN+  M+
Sbjct: 450 FHNVTNTTLQNLTPQLNYISMK 471


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 300 YLNLKLLFVLCI 335
           + N+ LLF+LC+
Sbjct: 188 FFNMHLLFLLCL 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,533
Number of Sequences: 336
Number of extensions: 1615
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)