Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f16
         (369 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   3.6  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    22   6.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   6.4  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 166 NETLVQKMLDYSFIMFPNLS 225
           N+ L+ K+  Y+F   PNL+
Sbjct: 624 NDNLISKVQSYTFFKKPNLT 643


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 302 IPFPLHDLRLKKPH 261
           I FP H  R+K PH
Sbjct: 12  IAFPKHSSRVKPPH 25


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 42   YIFIVLFMIFGKLF 1
            Y++ V F+IFG  F
Sbjct: 1541 YLYFVFFIIFGSFF 1554


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,199
Number of Sequences: 2352
Number of extensions: 6155
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)