Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f13
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    26   0.29 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.2  

>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 172 FVYGVGFNTMPESPVLHLYLLCIHK 246
           FV   G NT+PE  VLH+++  +H+
Sbjct: 72  FVTKTG-NTIPEGTVLHIHIFDLHR 95


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 172 IRYLDWDDLQLNRSQIDRPFIFQVI*MSDYLVT 74
           I +++WD +++ RSQ  R F   VI   DYL T
Sbjct: 108 IGFIEWDKVEIVRSQEGR-FEEAVI---DYLFT 136


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 443 GPPENGAPGHGP 408
           G P +G PG+GP
Sbjct: 230 GTPPSGEPGNGP 241


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 117 GLSIWLRFNCKSSQSRY 167
           GLS +LRF C S++  Y
Sbjct: 264 GLSPYLRFGCLSTRLFY 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,166
Number of Sequences: 336
Number of extensions: 4012
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)