Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f13
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    31   0.90 
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    31   0.90 
Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z71262-7|CAA95811.2|  368|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 230 YCVYTKCVLSLCPRNSQQVIQGRHRALW*IQCK 328
           Y V+T  VL++ P + Q  + GR+  L  +QCK
Sbjct: 72  YAVFTTAVLNMTPYHFQMYVNGRNCGLLTLQCK 104


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 230 YCVYTKCVLSLCPRNSQQVIQGRHRALW*IQCK 328
           Y V+T  VL++ P + Q  + GR+  L  +QCK
Sbjct: 54  YAVFTTAVLNMTPYHFQMYVNGRNCGLLTLQCK 86


>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +2

Query: 5   HD--IKASNILPLSVQTQRKTSPHVCDKII*HSNHLKDKRPVDLASIQL*IVPVEISDLF 178
           HD  +K    L  SVQ   ++   + DK I   + LKD   + + + +  ++   I + F
Sbjct: 295 HDEAVKVLEELTKSVQIYVESRDELVDKKIVLFSSLKDVEDLHVKATETGLLHYVIDNSF 354

Query: 179 MALDSIRCQSHLS 217
             LD  +CQ H++
Sbjct: 355 ANLDEKKCQPHVA 367


>Z71262-7|CAA95811.2|  368|Caenorhabditis elegans Hypothetical
           protein F22D6.9 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 124 RFGF-DSIVNRPSRDIGFVYGVGFNTMPESPVLHLYLLCIH 243
           ++GF    V R S  I  V+ + FN MP + +++  ++C+H
Sbjct: 185 QYGFYGECVRRYSERIYEVFQLAFNAMPLTAIVNKRIMCMH 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,993,798
Number of Sequences: 27780
Number of extensions: 375439
Number of successful extensions: 1225
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)