Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30f09
(407 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E47C8A Cluster: PREDICTED: similar to ENSANGP000... 118 5e-26
UniRef50_Q6P0U5 Cluster: Zgc:77732; n=4; Clupeocephala|Rep: Zgc:... 113 1e-24
UniRef50_P52652 Cluster: Putative transcription elongation facto... 113 1e-24
UniRef50_P23193 Cluster: Transcription elongation factor A prote... 111 5e-24
UniRef50_Q15560 Cluster: Transcription elongation factor A prote... 111 7e-24
UniRef50_Q9DGD2 Cluster: Transcription elongation factor XSII-K1... 110 1e-23
UniRef50_O75764 Cluster: Transcription elongation factor A prote... 110 1e-23
UniRef50_UPI00005A4643 Cluster: PREDICTED: similar to Transcript... 108 4e-23
UniRef50_Q4TIF2 Cluster: Chromosome undetermined SCAF2195, whole... 108 5e-23
UniRef50_A4S3C9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 88 6e-17
UniRef50_Q9VXS6 Cluster: CG8117-PA; n=2; Drosophila|Rep: CG8117-... 88 7e-17
UniRef50_P07273 Cluster: Transcription elongation factor S-II; n... 83 3e-15
UniRef50_Q8SS71 Cluster: TRANSCRIPTION ELONGATION FACTOR SII; n=... 81 6e-15
UniRef50_Q0UVI1 Cluster: Predicted protein; n=1; Phaeosphaeria n... 81 6e-15
UniRef50_A7TNI5 Cluster: Putative uncharacterized protein; n=1; ... 81 6e-15
UniRef50_A3LRC5 Cluster: Predicted protein; n=5; Saccharomycetal... 81 8e-15
UniRef50_A7Q3Y6 Cluster: Chromosome chr13 scaffold_48, whole gen... 79 4e-14
UniRef50_Q9ZVH8 Cluster: Putative elongation factor; n=5; Magnol... 78 8e-14
UniRef50_Q54YG9 Cluster: RNA polymerase II elongation factor; n=... 77 1e-13
UniRef50_P49373 Cluster: Transcription elongation factor S-II; n... 77 1e-13
UniRef50_Q6C6I8 Cluster: Similar to DEHA0C15686g Debaryomyces ha... 75 6e-13
UniRef50_Q0D7N2 Cluster: Os07g0229700 protein; n=4; Magnoliophyt... 75 7e-13
UniRef50_Q4P1X5 Cluster: Putative uncharacterized protein; n=1; ... 74 1e-12
UniRef50_Q5CVE1 Cluster: Transcription elongation factor TFIIS; ... 71 1e-11
UniRef50_A7AWE5 Cluster: Transcription factor S-II (TFIIS)and tr... 70 2e-11
UniRef50_A6RN27 Cluster: Transcription elongation factor S-II; n... 70 2e-11
UniRef50_Q4UH96 Cluster: Transcription elongation factor, putati... 69 4e-11
UniRef50_Q4N8B9 Cluster: Transcription elongation factor SII, pu... 67 1e-10
UniRef50_A5JZL5 Cluster: Transcription elongation factor, putati... 67 1e-10
UniRef50_Q2U4B9 Cluster: Transcription elongation factor TFIIS/C... 66 2e-10
UniRef50_Q9YPH8 Cluster: Transcription elongation factor SII; n=... 66 3e-10
UniRef50_Q1JT63 Cluster: Transcription elongation factor s-II, p... 66 3e-10
UniRef50_Q4DRW2 Cluster: Transcription elongation factor, putati... 66 3e-10
UniRef50_Q4Q3Q4 Cluster: Transcription elongation factor-like pr... 59 3e-08
UniRef50_A6QWZ4 Cluster: Predicted protein; n=1; Ajellomyces cap... 56 3e-07
UniRef50_Q9GZ09 Cluster: Transcription elongation factor TFIIS; ... 55 6e-07
UniRef50_Q5KFN4 Cluster: Positive transcription elongation facto... 55 6e-07
UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1; ... 54 8e-07
UniRef50_Q4CXN7 Cluster: Transcription elongation factor S-II, p... 53 2e-06
UniRef50_Q04307 Cluster: DNA-directed RNA polymerase III subunit... 53 2e-06
UniRef50_P27948 Cluster: Transcription factor S-II-related prote... 53 3e-06
UniRef50_Q5KEF1 Cluster: RNA polymerase III smallest subunit, pu... 52 3e-06
UniRef50_UPI0000161EFD Cluster: Transcription factor SII homolog... 52 4e-06
UniRef50_Q4QAW0 Cluster: Transcription elongation factor, putati... 52 4e-06
UniRef50_Q5YFI0 Cluster: Transcription elongation factor TFIIS; ... 52 6e-06
UniRef50_Q6GZP4 Cluster: Transcription elongation factor SII; n=... 51 1e-05
UniRef50_Q677Z7 Cluster: DNA-directed RNA polymerase subunit M; ... 51 1e-05
UniRef50_Q9Y2Y1 Cluster: DNA-directed RNA polymerase III subunit... 50 2e-05
UniRef50_UPI000069E932 Cluster: TFS2-M domain-containing protein... 50 2e-05
UniRef50_UPI0000499ED2 Cluster: hypothetical protein 230.t00020;... 49 3e-05
UniRef50_A7ASV0 Cluster: Transcription factor S-II protein, puta... 49 4e-05
UniRef50_Q5UQS8 Cluster: TFII-like transcription factor; n=1; Ac... 48 6e-05
UniRef50_Q97AQ6 Cluster: Transcription factor [TFIIS/RPB9]; n=5;... 48 7e-05
UniRef50_Q586X9 Cluster: Transcription elongation factor S-II, p... 48 1e-04
UniRef50_Q8N8B7 Cluster: TFS2-M domain-containing protein 1; n=2... 48 1e-04
UniRef50_UPI00004998C5 Cluster: RNA polymerase III subunit; n=1;... 47 1e-04
UniRef50_Q4DC35 Cluster: DNA-directed RNA polymerase subunit; n=... 47 1e-04
UniRef50_Q06VI2 Cluster: Putative uncharacterized protein; n=1; ... 46 2e-04
UniRef50_Q387Z6 Cluster: RNA polymerase III C11 subunit, putativ... 46 2e-04
UniRef50_Q74N12 Cluster: NEQ377; n=1; Nanoarchaeum equitans|Rep:... 46 2e-04
UniRef50_A2EBM6 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_A2RAZ1 Cluster: Complex: hRPC11 is a small; n=5; Euroti... 46 3e-04
UniRef50_Q197A5 Cluster: Putative uncharacterized protein; n=1; ... 45 5e-04
UniRef50_Q5CYY8 Cluster: RNA polymerase III subunit C11; n=1; Cr... 45 5e-04
UniRef50_A3LW94 Cluster: DNA-directed RNA polymerase subunit; n=... 45 5e-04
UniRef50_A2FMI1 Cluster: Putative uncharacterized protein; n=1; ... 45 7e-04
UniRef50_Q5V537 Cluster: DNA-directed RNA-polymerase subunit M; ... 45 7e-04
UniRef50_Q8SSB3 Cluster: DNA-DIRECTED RNA POLYMERASE III 12.5kDa... 44 9e-04
UniRef50_O13896 Cluster: DNA-directed RNA polymerase III subunit... 44 9e-04
UniRef50_Q9LNT2 Cluster: T20H2.16 protein; n=1; Arabidopsis thal... 44 0.001
UniRef50_Q2UH76 Cluster: Predicted protein; n=1; Aspergillus ory... 44 0.001
UniRef50_Q7QXB3 Cluster: GLP_741_50228_49188; n=1; Giardia lambl... 43 0.002
UniRef50_UPI00015A6C95 Cluster: TFS2-M domain-containing protein... 43 0.003
UniRef50_O96159 Cluster: Transcription factor, putative; n=5; Pl... 43 0.003
UniRef50_Q58548 Cluster: DNA-directed RNA polymerase subunit M; ... 43 0.003
UniRef50_Q9N4B7 Cluster: DNA-directed RNA polymerase subunit; n=... 42 0.004
UniRef50_Q9YEZ3 Cluster: Archaeal transcription factor S; n=2; T... 42 0.004
UniRef50_Q8PX24 Cluster: DNA-directed RNA polymerase subunit M; ... 42 0.004
UniRef50_A0RXH6 Cluster: DNA-directed RNA polymerase, subunit M/... 42 0.004
UniRef50_Q4QDH9 Cluster: RNA polymerase III C11 subunit, putativ... 42 0.005
UniRef50_Q07271 Cluster: DNA-directed RNA polymerase subunit M; ... 42 0.005
UniRef50_Q7QQW3 Cluster: DNA-directed RNA polymerase subunit; n=... 42 0.006
UniRef50_A4R9N1 Cluster: Predicted protein; n=1; Magnaporthe gri... 42 0.006
UniRef50_A7DQB3 Cluster: Transcription termination factor Tfs; n... 42 0.006
UniRef50_Q5V5C5 Cluster: DNA-directed RNA-polymerase subunit M; ... 41 0.008
UniRef50_Q9P9I8 Cluster: Archaeal transcription factor S; n=2; M... 41 0.008
UniRef50_Q4A328 Cluster: Transcription factor S-II (TFIIS) famil... 41 0.011
UniRef50_Q6EU09 Cluster: DNA-directed RNA polymerase subunit; n=... 41 0.011
UniRef50_A3DM83 Cluster: Transcription factor S; n=1; Staphyloth... 40 0.015
UniRef50_A0CNA6 Cluster: Chromosome undetermined scaffold_22, wh... 40 0.019
UniRef50_P32529 Cluster: DNA-directed RNA polymerase I subunit R... 40 0.019
UniRef50_A4RUS3 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 40 0.025
UniRef50_Q0W2J5 Cluster: Archaeal transcription factor S; n=4; E... 40 0.025
UniRef50_Q9J5C0 Cluster: DNA-directed RNA polymerase 30 kDa poly... 40 0.025
UniRef50_UPI00006C17FE Cluster: PREDICTED: similar to polymerase... 39 0.034
UniRef50_Q15ES4 Cluster: RNA polymerase III subunit C11-like pro... 39 0.034
UniRef50_UPI0000F328A1 Cluster: UPI0000F328A1 related cluster; n... 39 0.045
UniRef50_Q9LU97 Cluster: Similarity to transcription-associated ... 39 0.045
UniRef50_A7D318 Cluster: Transcription factor TFIIS; n=1; Haloru... 39 0.045
UniRef50_Q5KKH5 Cluster: DNA-directed RNA polymerase subunit; n=... 38 0.059
UniRef50_Q01C33 Cluster: RNA polymerase III subunit C11; n=2; Os... 38 0.078
UniRef50_Q91FH5 Cluster: 349L; n=1; Invertebrate iridescent viru... 38 0.10
UniRef50_Q4N7G2 Cluster: Putative uncharacterized protein; n=2; ... 38 0.10
UniRef50_A2EHZ7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.10
UniRef50_O17587 Cluster: Putative uncharacterized protein; n=2; ... 37 0.14
UniRef50_A0DS61 Cluster: Chromosome undetermined scaffold_61, wh... 37 0.14
UniRef50_Q8ZTX9 Cluster: DNA-directed RNA polymerase subunit M; ... 37 0.14
UniRef50_A1RXU9 Cluster: Transcription termination factor Tfs; n... 37 0.14
UniRef50_A0B7Y7 Cluster: Transcription factor TFIIS; n=1; Methan... 37 0.18
UniRef50_O94703 Cluster: DNA-directed RNA polymerase I subunit R... 37 0.18
UniRef50_Q4T1I2 Cluster: Chromosome undetermined SCAF10575, whol... 36 0.24
UniRef50_Q9VD81 Cluster: DNA-directed RNA polymerase subunit; n=... 36 0.24
UniRef50_Q7QY69 Cluster: GLP_572_32225_32536; n=1; Giardia lambl... 36 0.31
UniRef50_A0CQT2 Cluster: Chromosome undetermined scaffold_24, wh... 36 0.31
UniRef50_Q8SRA1 Cluster: DNA-DIRECTED RNA POLYMERASE I SUBUNIT M... 36 0.31
UniRef50_Q2NEY4 Cluster: RpoM2; n=2; Methanobacteriaceae|Rep: Rp... 36 0.31
UniRef50_P33796 Cluster: DNA-directed RNA polymerase 30 kDa poly... 36 0.31
UniRef50_P36958 Cluster: DNA-directed RNA polymerase II subunit ... 36 0.42
UniRef50_Q6TVG7 Cluster: ORF021 RNA polymerase subunit RPO30; n=... 35 0.55
UniRef50_Q4KSC5 Cluster: Transcription elongation factor SII; n=... 35 0.55
UniRef50_Q54NX7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.73
UniRef50_Q2P9W0 Cluster: RNA polymerase I subunit RPA12; n=2; Tr... 35 0.73
UniRef50_UPI00006600EC Cluster: DNA-directed RNA polymerase I su... 34 0.96
UniRef50_Q98TK0 Cluster: RNA polymerase III smallest subunit; n=... 34 0.96
UniRef50_A7ARU9 Cluster: Putative uncharacterized protein; n=1; ... 34 0.96
UniRef50_Q2H0C1 Cluster: DNA-directed RNA polymerase subunit; n=... 34 0.96
UniRef50_UPI00006CB60F Cluster: hypothetical protein TTHERM_0044... 34 1.3
UniRef50_Q8L5V0 Cluster: RNA Polymerase II subunit 14.5 kD, puta... 34 1.3
UniRef50_Q5DGH5 Cluster: SJCHGC08580 protein; n=1; Schistosoma j... 34 1.3
UniRef50_Q4P4T4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_O27369 Cluster: DNA-directed RNA polymerase subunit M; ... 34 1.3
UniRef50_UPI000049984E Cluster: DNA-directed RNA polymerase I su... 33 1.7
UniRef50_Q9LNK0 Cluster: DNA-directed RNA polymerase subunit; n=... 33 1.7
UniRef50_Q0DP65 Cluster: Os03g0711700 protein; n=4; Oryza sativa... 33 1.7
UniRef50_Q55GG8 Cluster: DNA-directed RNA polymerase subunit; n=... 33 1.7
UniRef50_A2F9H5 Cluster: Putative uncharacterized protein; n=4; ... 33 2.2
UniRef50_A0DQ53 Cluster: Chromosome undetermined scaffold_6, who... 33 2.2
UniRef50_UPI0000F2BA0A Cluster: PREDICTED: similar to zinc finge... 33 2.9
UniRef50_Q22YI7 Cluster: Transporter, cation channel family; n=2... 33 2.9
UniRef50_A0BJ84 Cluster: Chromosome undetermined scaffold_11, wh... 33 2.9
UniRef50_Q2UPH8 Cluster: Zn-finger protein; n=2; Pezizomycotina|... 33 2.9
UniRef50_Q0CCS2 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q8GSD5 Cluster: Putative RNA Polymerase II subunit 14.5... 32 3.9
UniRef50_Q4Q100 Cluster: Transcription factor S-II-like protein;... 32 3.9
UniRef50_A0E7M3 Cluster: Chromosome undetermined scaffold_81, wh... 32 5.1
UniRef50_Q6C1C2 Cluster: DNA-directed RNA polymerase subunit; n=... 32 5.1
UniRef50_Q55895 Cluster: Serum resistance locus; BrkB; n=1; Syne... 31 6.8
UniRef50_Q5DAX2 Cluster: SJCHGC05867 protein; n=1; Schistosoma j... 31 6.8
UniRef50_P36954 Cluster: DNA-directed RNA polymerase II subunit ... 31 6.8
UniRef50_P53181 Cluster: Putative uncharacterized protein YGL042... 31 8.9
>UniRef50_UPI0000E47C8A Cluster: PREDICTED: similar to
ENSANGP00000027484; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000027484
- Strongylocentrotus purpuratus
Length = 255
Score = 118 bits (284), Expect = 5e-26
Identities = 47/65 (72%), Positives = 58/65 (89%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+KF KEAI+D QLA +GT++ +L CGKC+KKNCTYNQ+QTRS+DEPMTTFV CN+CG+
Sbjct: 191 RQKFTKEAINDHQLAHTEGTRSALLTCGKCRKKNCTYNQMQTRSADEPMTTFVFCNDCGH 250
Query: 183 RWKFC 197
RWKFC
Sbjct: 251 RWKFC 255
>UniRef50_Q6P0U5 Cluster: Zgc:77732; n=4; Clupeocephala|Rep:
Zgc:77732 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 409
Score = 113 bits (273), Expect = 1e-24
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++L+CGKCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 345 RNVLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 404
Query: 183 RWKFC 197
RWKFC
Sbjct: 405 RWKFC 409
>UniRef50_P52652 Cluster: Putative transcription elongation factor
S-II; n=2; Caenorhabditis|Rep: Putative transcription
elongation factor S-II - Caenorhabditis elegans
Length = 308
Score = 113 bits (272), Expect = 1e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+KF KEAI + Q++ QGT ++M KCGKC KKNCTY QLQTRSSDEPMTTFV C ECGN
Sbjct: 244 RDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGN 303
Query: 183 RWKFC 197
RWKFC
Sbjct: 304 RWKFC 308
>UniRef50_P23193 Cluster: Transcription elongation factor A protein
1; n=41; Eumetazoa|Rep: Transcription elongation factor
A protein 1 - Homo sapiens (Human)
Length = 301
Score = 111 bits (267), Expect = 5e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 237 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 296
Query: 183 RWKFC 197
RWKFC
Sbjct: 297 RWKFC 301
>UniRef50_Q15560 Cluster: Transcription elongation factor A protein
2; n=55; Coelomata|Rep: Transcription elongation factor
A protein 2 - Homo sapiens (Human)
Length = 299
Score = 111 bits (266), Expect = 7e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 235 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 294
Query: 183 RWKFC 197
RWKFC
Sbjct: 295 RWKFC 299
>UniRef50_Q9DGD2 Cluster: Transcription elongation factor XSII-K1;
n=7; Euteleostomi|Rep: Transcription elongation factor
XSII-K1 - Xenopus laevis (African clawed frog)
Length = 645
Score = 110 bits (264), Expect = 1e-23
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT+T++L+C KCKKKNC+YNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 581 RNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNECGN 640
Query: 183 RWKFC 197
RWKFC
Sbjct: 641 RWKFC 645
>UniRef50_O75764 Cluster: Transcription elongation factor A protein
3; n=21; Eutheria|Rep: Transcription elongation factor A
protein 3 - Homo sapiens (Human)
Length = 348
Score = 110 bits (264), Expect = 1e-23
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++ +C KCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 284 RNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 343
Query: 183 RWKFC 197
RWKFC
Sbjct: 344 RWKFC 348
>UniRef50_UPI00005A4643 Cluster: PREDICTED: similar to Transcription
elongation factor A protein 2 (Transcription elongation
factor S-II protein 2) (Testis-specific S-II)
(Transcription elongation factor TFIIS.l); n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to
Transcription elongation factor A protein 2
(Transcription elongation factor S-II protein 2)
(Testis-specific S-II) (Transcription elongation factor
TFIIS.l) - Canis familiaris
Length = 451
Score = 108 bits (260), Expect = 4e-23
Identities = 43/65 (66%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CG+C++KNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 387 RKAMTKEAIREHQMARTGGTQTDLFTCGRCRRKNCTYTQVQTRSSDEPMTTFVVCNECGN 446
Query: 183 RWKFC 197
RWKFC
Sbjct: 447 RWKFC 451
>UniRef50_Q4TIF2 Cluster: Chromosome undetermined SCAF2195, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2195,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 255
Score = 108 bits (259), Expect = 5e-23
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++L+CGKCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 193 RNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 252
Query: 183 RWK 191
RWK
Sbjct: 253 RWK 255
>UniRef50_A4S3C9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 173
Score = 88.2 bits (209), Expect = 6e-17
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
Q T+ KCGKCK++ CTY QLQTRS+DEPMTTFV C ECGNRWKFC
Sbjct: 126 QEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVECGNRWKFC 173
>UniRef50_Q9VXS6 Cluster: CG8117-PA; n=2; Drosophila|Rep: CG8117-PA
- Drosophila melanogaster (Fruit fly)
Length = 162
Score = 87.8 bits (208), Expect = 7e-17
Identities = 35/63 (55%), Positives = 50/63 (79%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+K+++++I+ AQ+A VQGTKT+ KC +C K+NC +QL R DEP+ TFV+C+ECGN
Sbjct: 101 RQKYVQDSINAAQMAKVQGTKTDQFKCERCDKRNC--SQLHIRDGDEPIITFVICDECGN 158
Query: 183 RWK 191
RWK
Sbjct: 159 RWK 161
>UniRef50_P07273 Cluster: Transcription elongation factor S-II; n=5;
Saccharomycetales|Rep: Transcription elongation factor
S-II - Saccharomyces cerevisiae (Baker's yeast)
Length = 309
Score = 82.6 bits (195), Expect = 3e-15
Identities = 34/63 (53%), Positives = 46/63 (73%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
E+ K+ + +AQ AT++ + T+ CGKCK+K +Y QLQTRS+DEP+TTF C CGNR
Sbjct: 246 EEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNR 305
Query: 186 WKF 194
WKF
Sbjct: 306 WKF 308
>UniRef50_Q8SS71 Cluster: TRANSCRIPTION ELONGATION FACTOR SII; n=1;
Encephalitozoon cuniculi|Rep: TRANSCRIPTION ELONGATION
FACTOR SII - Encephalitozoon cuniculi
Length = 257
Score = 81.4 bits (192), Expect = 6e-15
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +3
Query: 9 KFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
K I+ ++ + Q+ T Q +T++ KC KC ++ C+Y QLQTRS DEPMTTFV C ECGN+W
Sbjct: 197 KMIEVSLYECQIPT-QKAETDIFKCSKCGERKCSYRQLQTRSGDEPMTTFVTC-ECGNKW 254
Query: 189 KFC 197
+FC
Sbjct: 255 RFC 257
>UniRef50_Q0UVI1 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 301
Score = 81.4 bits (192), Expect = 6e-15
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
EK KE ++ A +A V+ + ++ +CGKCKKK +Y+Q QTRS+DEPMTTF C CGNR
Sbjct: 238 EKLEKENMNQAMVAQVEKSISKEFQCGKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNR 297
Query: 186 WKF 194
WKF
Sbjct: 298 WKF 300
>UniRef50_A7TNI5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 323
Score = 81.4 bits (192), Expect = 6e-15
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
E+ ++ + +AQ AT++ + T+ CGKCK+K +Y QLQTRS+DEP+TTF C CGNR
Sbjct: 260 EEITRQNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNR 319
Query: 186 WKF 194
WKF
Sbjct: 320 WKF 322
>UniRef50_A3LRC5 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 294
Score = 81.0 bits (191), Expect = 8e-15
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
EK K+ + DAQ AT + T+ CGKCK K +Y Q+QTRS+DEP+TTF C CGNR
Sbjct: 231 EKLHKKNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNR 290
Query: 186 WKF 194
WKF
Sbjct: 291 WKF 293
>UniRef50_A7Q3Y6 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 309
Score = 78.6 bits (185), Expect = 4e-14
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 15 IKE-AIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
IKE A+ D +L T+ KCG+C ++ TY QLQTRS+DEPMTTFV C C N WK
Sbjct: 248 IKEKALFDCELGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 307
Query: 192 FC 197
FC
Sbjct: 308 FC 309
>UniRef50_Q9ZVH8 Cluster: Putative elongation factor; n=5;
Magnoliophyta|Rep: Putative elongation factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 378
Score = 77.8 bits (183), Expect = 8e-14
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 15 IKE-AIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
IKE A+ D + T+ KCG+C ++ CTY Q+QTRS+DEPMTT+V C C N WK
Sbjct: 317 IKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 376
Query: 192 FC 197
FC
Sbjct: 377 FC 378
>UniRef50_Q54YG9 Cluster: RNA polymerase II elongation factor; n=1;
Dictyostelium discoideum AX4|Rep: RNA polymerase II
elongation factor - Dictyostelium discoideum AX4
Length = 319
Score = 77.4 bits (182), Expect = 1e-13
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NEC 176
R+K K + + L T+ +CGKCK++ CTY QLQTRS+DEP TTFV C C
Sbjct: 253 RKKLDKFNTEASMLGQNNEATTDQFQCGKCKQRKCTYTQLQTRSADEPPTTFVKCCVKGC 312
Query: 177 GNRWKFC 197
GNRW+FC
Sbjct: 313 GNRWRFC 319
>UniRef50_P49373 Cluster: Transcription elongation factor S-II; n=1;
Schizosaccharomyces pombe|Rep: Transcription elongation
factor S-II - Schizosaccharomyces pombe (Fission yeast)
Length = 293
Score = 77.0 bits (181), Expect = 1e-13
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = +3
Query: 9 KFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
K +E + AQ A Q T++ CGKCK+K +Y Q+QTRS+DEPMTTF C CGNRW
Sbjct: 231 KLEQENLFHAQGAKPQKAVTDLFTCGKCKQKKVSYYQMQTRSADEPMTTFCECTVCGNRW 290
Query: 189 KF 194
KF
Sbjct: 291 KF 292
>UniRef50_Q6C6I8 Cluster: Similar to DEHA0C15686g Debaryomyces
hansenii; n=1; Yarrowia lipolytica|Rep: Similar to
DEHA0C15686g Debaryomyces hansenii - Yarrowia lipolytica
(Candida lipolytica)
Length = 295
Score = 74.9 bits (176), Expect = 6e-13
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
E+ K+ + A+ AT Q T+ CGKCK+K +Y Q+QTRS+DEP+TTF C CG R
Sbjct: 232 EEMEKQNLFAARGATEQRAVTDRFTCGKCKQKKVSYYQMQTRSADEPLTTFCTCENCGTR 291
Query: 186 WKF 194
WKF
Sbjct: 292 WKF 294
>UniRef50_Q0D7N2 Cluster: Os07g0229700 protein; n=4;
Magnoliophyta|Rep: Os07g0229700 protein - Oryza sativa
subsp. japonica (Rice)
Length = 379
Score = 74.5 bits (175), Expect = 7e-13
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
+K ++A+ + + T+ KCG+C ++ TY QLQTRS+DEPMTTFV C C N
Sbjct: 316 KKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNH 375
Query: 186 WKFC 197
WKFC
Sbjct: 376 WKFC 379
>UniRef50_Q4P1X5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 74.1 bits (174), Expect = 1e-12
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +3
Query: 36 AQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
A+ A Q +T+ +CG+CK++ Y Q+QTRS+DEPMTTFV C C ++WKFC
Sbjct: 262 AKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWKFC 315
>UniRef50_Q5CVE1 Cluster: Transcription elongation factor TFIIS;
n=2; Cryptosporidium|Rep: Transcription elongation
factor TFIIS - Cryptosporidium parvum Iowa II
Length = 332
Score = 70.5 bits (165), Expect = 1e-11
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
K CGKCK TY Q+QTRS+DEPMTTFV C CGNRWKF
Sbjct: 289 KEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWKF 332
>UniRef50_A7AWE5 Cluster: Transcription factor S-II (TFIIS)and
transcription factor S-II (TFIIS) central domain
containing protein; n=1; Babesia bovis|Rep:
Transcription factor S-II (TFIIS)and transcription
factor S-II (TFIIS) central domain containing protein -
Babesia bovis
Length = 302
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = +3
Query: 42 LATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
L + +G K KC KC Y QLQTRSSDEPMTTFV C EC NRWKF
Sbjct: 252 LLSKEGKKKGQFKCLKCHSMETVYYQLQTRSSDEPMTTFVTCLECNNRWKF 302
>UniRef50_A6RN27 Cluster: Transcription elongation factor S-II; n=6;
Pezizomycotina|Rep: Transcription elongation factor S-II
- Botryotinia fuckeliana B05.10
Length = 301
Score = 69.7 bits (163), Expect = 2e-11
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
E + AQ+ + + ++ L CGKC +K +Y+Q QTRS+DEPMTTF C CG+RWKF
Sbjct: 243 ENMKKAQVPMAEKSISDALTCGKCGQKKVSYSQAQTRSADEPMTTFCECQVCGHRWKF 300
>UniRef50_Q4UH96 Cluster: Transcription elongation factor, putative;
n=1; Theileria annulata|Rep: Transcription elongation
factor, putative - Theileria annulata
Length = 418
Score = 68.9 bits (161), Expect = 4e-11
Identities = 29/39 (74%), Positives = 29/39 (74%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
KC KC K TY QLQTRSSDEPMTTFV C C NRWKF
Sbjct: 380 KCNKCNSKITTYYQLQTRSSDEPMTTFVTCLNCNNRWKF 418
>UniRef50_Q4N8B9 Cluster: Transcription elongation factor SII,
putative; n=1; Theileria parva|Rep: Transcription
elongation factor SII, putative - Theileria parva
Length = 324
Score = 66.9 bits (156), Expect = 1e-10
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
KC KC K TY QLQTRSSDEPMTTFV C C NRW+F
Sbjct: 286 KCNKCNSKVTTYYQLQTRSSDEPMTTFVTCLNCKNRWRF 324
>UniRef50_A5JZL5 Cluster: Transcription elongation factor, putative;
n=5; Plasmodium|Rep: Transcription elongation factor,
putative - Plasmodium vivax
Length = 435
Score = 66.9 bits (156), Expect = 1e-10
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +3
Query: 33 DAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
D + ++ T+ +C KCK Y+QLQTRSSDEPMTTFV C +C NRWKF
Sbjct: 382 DVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNRWKF 435
>UniRef50_Q2U4B9 Cluster: Transcription elongation factor
TFIIS/Cofactor of enhancer-binding protein Sp1; n=8;
Eurotiomycetidae|Rep: Transcription elongation factor
TFIIS/Cofactor of enhancer-binding protein Sp1 -
Aspergillus oryzae
Length = 304
Score = 66.5 bits (155), Expect = 2e-10
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +3
Query: 9 KFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
K KE +D A +A + + + L+CGKC ++ TY + QTRS+DEPMT F C CG W
Sbjct: 243 KIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKSW 302
Query: 189 K 191
K
Sbjct: 303 K 303
>UniRef50_Q9YPH8 Cluster: Transcription elongation factor SII; n=8;
Chlorovirus|Rep: Transcription elongation factor SII -
Chlorella virus
Length = 180
Score = 66.1 bits (154), Expect = 3e-10
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +3
Query: 72 MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
ML+CGKCK + +Y ++QTRS+DEPMT F C+ CG+RWK
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHSCGSRWK 179
>UniRef50_Q1JT63 Cluster: Transcription elongation factor s-II,
putative; n=1; Toxoplasma gondii RH|Rep: Transcription
elongation factor s-II, putative - Toxoplasma gondii RH
Length = 418
Score = 66.1 bits (154), Expect = 3e-10
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
C KC+ Y Q+QTRSSDEPMTTFV C ECGNRWKF
Sbjct: 381 CFKCRTTKTVYFQMQTRSSDEPMTTFVTCLECGNRWKF 418
>UniRef50_Q4DRW2 Cluster: Transcription elongation factor, putative;
n=3; Trypanosoma|Rep: Transcription elongation factor,
putative - Trypanosoma cruzi
Length = 243
Score = 65.7 bits (153), Expect = 3e-10
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 EKFIKEAIDD--AQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
E+F+K + D +++ TK+ + C CK ++C++ Q QTRS+DEPMT F +CN C
Sbjct: 178 EEFLKRSKDTDLSEIRRAMATKSTLFPCPSCKARDCSWTQKQTRSADEPMTVFCICNVCD 237
Query: 180 NRWK 191
++W+
Sbjct: 238 HKWR 241
>UniRef50_Q4Q3Q4 Cluster: Transcription elongation factor-like
protein; n=3; Leishmania|Rep: Transcription elongation
factor-like protein - Leishmania major
Length = 473
Score = 59.3 bits (137), Expect = 3e-08
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
EA D+A L T + KCG+C K++CT+ + QTRS+DEP T ++ C +C N W
Sbjct: 420 EAADNAMLNI-----TSLFKCGRCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>UniRef50_A6QWZ4 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 378
Score = 56.0 bits (129), Expect = 3e-07
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +3
Query: 18 KEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC 167
KE +D A +A + + + L+CGKC +K TY + QTRS+DEPMT F C
Sbjct: 314 KENMDKAMVAKAERSISTSLQCGKCGQKKVTYTEAQTRSADEPMTLFCTC 363
>UniRef50_Q9GZ09 Cluster: Transcription elongation factor TFIIS;
n=2; Moneuplotes crassus|Rep: Transcription elongation
factor TFIIS - Euplotes crassus
Length = 328
Score = 54.8 bits (126), Expect = 6e-07
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
K M C KCK K T+ + QTRS+DEPMTTFV C C + KF
Sbjct: 285 KEGMYTCEKCKSKKTTFYEQQTRSADEPMTTFVQCLMCSHNMKF 328
>UniRef50_Q5KFN4 Cluster: Positive transcription elongation factor,
putative; n=1; Filobasidiella neoformans|Rep: Positive
transcription elongation factor, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 349
Score = 54.8 bits (126), Expect = 6e-07
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMT 152
+EK + + A+ V +T+ KCG+C ++ CTY Q+QTRS+DEPMT
Sbjct: 288 KEKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMT 337
>UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1;
Tetrahymena thermophila SB210|Rep: transcription factor
S-II - Tetrahymena thermophila SB210
Length = 356
Score = 54.4 bits (125), Expect = 8e-07
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 51 VQGTKTEMLKCGKCKKKNC-TYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+QG + E+ C CKKK +LQTRSSDEPMT F+ CN CG WK
Sbjct: 310 LQGLEGEL--CKGCKKKTAFLVKELQTRSSDEPMTRFMECNSCGKSWK 355
>UniRef50_Q4CXN7 Cluster: Transcription elongation factor S-II,
putative; n=2; Trypanosoma cruzi|Rep: Transcription
elongation factor S-II, putative - Trypanosoma cruzi
Length = 477
Score = 53.2 bits (122), Expect = 2e-06
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +3
Query: 9 KFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
K I+E + +LA V + T + KC C K C+Y + QTRS+DEP T FV C EC W
Sbjct: 418 KMIEEQ-EKLKLANV--SVTSLFKCPNCGKNRCSYYEQQTRSADEPTTKFVTCLECKYVW 474
>UniRef50_Q04307 Cluster: DNA-directed RNA polymerase III subunit
RPC10; n=11; Ascomycota|Rep: DNA-directed RNA polymerase
III subunit RPC10 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 110
Score = 53.2 bits (122), Expect = 2e-06
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 3 REKFIKEAIDDAQLA---TVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNE 173
R+K ++ +DD V TKT+ C ++ + QLQ RS+DEPMTTF C
Sbjct: 43 RKKLPRKEVDDVLGGGWDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN 102
Query: 174 CGNRWK 191
CG+RWK
Sbjct: 103 CGHRWK 108
>UniRef50_P27948 Cluster: Transcription factor S-II-related protein;
n=2; African swine fever virus|Rep: Transcription factor
S-II-related protein - African swine fever virus (strain
BA71V) (ASFV)
Length = 243
Score = 52.8 bits (121), Expect = 3e-06
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
+++ KC CK++ CTY ++QTR+ DEP T F C +CG+ +
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>UniRef50_Q5KEF1 Cluster: RNA polymerase III smallest subunit,
putative; n=2; Filobasidiella neoformans|Rep: RNA
polymerase III smallest subunit, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 132
Score = 52.4 bits (120), Expect = 3e-06
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C KC + + Q+Q RS+DEPMTTF C ECG++W+
Sbjct: 68 CPKCDHRRAYFRQMQIRSADEPMTTFYKCCECGHQWR 104
>UniRef50_UPI0000161EFD Cluster: Transcription factor SII homolog;
n=1; Lymphocystis disease virus 1|Rep: Transcription
factor SII homolog - Lymphocystis disease virus 1
Length = 89
Score = 52.0 bits (119), Expect = 4e-06
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
+ + I+E D+ L ++ K +LKC KCKK +QTRS+DEPM+ +C CG
Sbjct: 27 KNRLIEEHEDNYFLNPIEVEKG-ILKCRKCKKTKIFSTHVQTRSADEPMSLIAMCYSCGY 85
Query: 183 RW 188
+W
Sbjct: 86 KW 87
>UniRef50_Q4QAW0 Cluster: Transcription elongation factor, putative;
n=2; Leishmania|Rep: Transcription elongation factor,
putative - Leishmania major
Length = 333
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQG----TKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNE 173
E+ I+E D L+ ++ + + + KC C ++ ++ Q QTRS DEPMT + CN+
Sbjct: 266 EEKIEERSKDTNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNK 325
Query: 174 CGNRWK 191
C +W+
Sbjct: 326 CNTQWR 331
>UniRef50_Q5YFI0 Cluster: Transcription elongation factor TFIIS;
n=2; Singapore grouper iridovirus|Rep: Transcription
elongation factor TFIIS - Singapore grouper iridovirus
Length = 92
Score = 51.6 bits (118), Expect = 6e-06
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3
Query: 75 LKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
L+C KC K Q QTRS+DEPMT F +C+ CG RW
Sbjct: 53 LQCPKCGCKKVHVVQRQTRSADEPMTVFAVCSNCGKRW 90
>UniRef50_Q6GZP4 Cluster: Transcription elongation factor SII; n=3;
Ranavirus|Rep: Transcription elongation factor SII -
Frog virus 3 (FV3)
Length = 92
Score = 50.8 bits (116), Expect = 1e-05
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 75 LKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
+KC C + Q QTRS+DEPMT F +C+ECG RW
Sbjct: 53 VKCPGCGSRRVHALQRQTRSADEPMTLFAMCSECGKRW 90
>UniRef50_Q677Z7 Cluster: DNA-directed RNA polymerase subunit M;
n=1; Lymphocystis disease virus - isolate China|Rep:
DNA-directed RNA polymerase subunit M - Lymphocystis
disease virus - isolate China
Length = 79
Score = 50.8 bits (116), Expect = 1e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 60 TKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
T+ LKC KCKK N +Q RS+DEPM+ C CG +W
Sbjct: 34 TEKSFLKCKKCKKNNVLSTHIQIRSADEPMSLAATCYSCGYKW 76
>UniRef50_Q9Y2Y1 Cluster: DNA-directed RNA polymerase III subunit
RPC10; n=21; Fungi/Metazoa group|Rep: DNA-directed RNA
polymerase III subunit RPC10 - Homo sapiens (Human)
Length = 108
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>UniRef50_UPI000069E932 Cluster: TFS2-M domain-containing protein
1.; n=2; Xenopus tropicalis|Rep: TFS2-M
domain-containing protein 1. - Xenopus tropicalis
Length = 346
Score = 49.6 bits (113), Expect = 2e-05
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Frame = +3
Query: 3 REKFIKEAIDDAQLAT-VQGTKTEMLKCGKCKKKNCTYNQL-----------QTRSSDEP 146
R + + + + QL V G T ++C +C K NCT + +T + DE
Sbjct: 265 RANYTETCVQEHQLPQGVDGVHTNKIRCRRCDKFNCTVTMISRGTLFLPGWVRTGNPDEE 324
Query: 147 MTTFVLCNECGNRW 188
M TFV+CNECG +W
Sbjct: 325 MMTFVICNECGEQW 338
>UniRef50_UPI0000499ED2 Cluster: hypothetical protein 230.t00020;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 230.t00020 - Entamoeba histolytica HM-1:IMSS
Length = 78
Score = 49.2 bits (112), Expect = 3e-05
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
KCGKC + QTRS+DEPMT F+ C CG WK
Sbjct: 38 KCGKCGSRKIQETLAQTRSADEPMTRFLTCASCGFFWK 75
>UniRef50_A7ASV0 Cluster: Transcription factor S-II protein,
putative; n=3; Piroplasmida|Rep: Transcription factor
S-II protein, putative - Babesia bovis
Length = 109
Score = 48.8 bits (111), Expect = 4e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C C K + +QTRS+DEPMT F +C C +RWK
Sbjct: 72 CPSCHNKEAYFMSIQTRSADEPMTQFFVCTACRHRWK 108
>UniRef50_Q5UQS8 Cluster: TFII-like transcription factor; n=1;
Acanthamoeba polyphaga mimivirus|Rep: TFII-like
transcription factor - Mimivirus
Length = 173
Score = 48.4 bits (110), Expect = 6e-05
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R++ +E ++ Q+ATV E C CK + + QLQTRS+DEPMTTF +C C
Sbjct: 115 RKQMTEETLN--QMATV-----EWKPCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMK 167
Query: 183 RWK 191
+K
Sbjct: 168 TYK 170
>UniRef50_Q97AQ6 Cluster: Transcription factor [TFIIS/RPB9]; n=5;
Thermoplasmatales|Rep: Transcription factor [TFIIS/RPB9]
- Thermoplasma volcanium
Length = 106
Score = 48.0 bits (109), Expect = 7e-05
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C +C K Y QTRS+DEP T F C ECG RW+
Sbjct: 68 CPRCHHKGARYVLKQTRSADEPETKFYTCEECGYRWR 104
>UniRef50_Q586X9 Cluster: Transcription elongation factor S-II,
putative; n=1; Trypanosoma brucei|Rep: Transcription
elongation factor S-II, putative - Trypanosoma brucei
Length = 467
Score = 47.6 bits (108), Expect = 1e-04
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
T + +C +C + C + +LQ RS+DEP T F+ C +C + W
Sbjct: 424 TSLFECPECHGRECEWRELQIRSADEPTTKFIKCIKCKHNW 464
>UniRef50_Q8N8B7 Cluster: TFS2-M domain-containing protein 1; n=20;
Amniota|Rep: TFS2-M domain-containing protein 1 - Homo
sapiens (Human)
Length = 351
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATV-QGTKTEMLKCGKCKKKNCTYNQLQ---------TRSS--DEP 146
R + + I + L V GT+T +KC +C+K NC + R+S DE
Sbjct: 270 RASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQ 329
Query: 147 MTTFVLCNECGNRW 188
M T+V+CNECG +W
Sbjct: 330 MMTYVICNECGEQW 343
>UniRef50_UPI00004998C5 Cluster: RNA polymerase III subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: RNA polymerase III
subunit - Entamoeba histolytica HM-1:IMSS
Length = 107
Score = 47.2 bits (107), Expect = 1e-04
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--EC 176
+ K I + + Q Q KTE++ C KC + + Q+Q RS+DEPMTTF C +C
Sbjct: 44 KRKQIDAVLGEEQWKNAQ--KTEII-CEKCGHNSAYFMQIQIRSADEPMTTFYKCANFDC 100
Query: 177 GNRWK 191
G +W+
Sbjct: 101 GYQWR 105
>UniRef50_Q4DC35 Cluster: DNA-directed RNA polymerase subunit; n=2;
Trypanosoma cruzi|Rep: DNA-directed RNA polymerase
subunit - Trypanosoma cruzi
Length = 167
Score = 47.2 bits (107), Expect = 1e-04
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
E +D QL TV+ E C Y Q+Q RS+DEP TTF C +CG +WK
Sbjct: 113 EEVDGGQLITVRCQNDEKF----CDGNRAHYVQIQMRSADEPATTFFKCLKCGFQWK 165
>UniRef50_Q06VI2 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 85
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 12 FIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
FIK +++ + L+C +C Q R DEPMT F +C+ CG RW
Sbjct: 25 FIKYIYEESLQLQKPEVEEGALQCNRCNSHKIHCTARQVRGGDEPMTVFAICSNCGKRW 83
>UniRef50_Q387Z6 Cluster: RNA polymerase III C11 subunit, putative;
n=1; Trypanosoma brucei|Rep: RNA polymerase III C11
subunit, putative - Trypanosoma brucei
Length = 126
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +3
Query: 18 KEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+E +D Q+ TV+ E +C Y Q+Q RS+DEP TTF C +CG +WK
Sbjct: 71 EEEVDGGQVITVRCQNDEK----QCDGDRAHYVQIQMRSADEPATTFFKCLKCGFQWK 124
>UniRef50_Q74N12 Cluster: NEQ377; n=1; Nanoarchaeum equitans|Rep:
NEQ377 - Nanoarchaeum equitans
Length = 106
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 60 TKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+K + +KC KC + Y LQTR+SDE T F C +CG W+
Sbjct: 60 SKAKGVKCPKCSSEEVVYFTLQTRASDEAETIFYKCLKCGYTWR 103
>UniRef50_A2EBM6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 109
Score = 46.0 bits (104), Expect = 3e-04
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+C KC + ++Q RS+DEP T F C +CGN W+
Sbjct: 70 RCDKCGHNEAFFTEIQIRSADEPATLFFKCCKCGNTWR 107
>UniRef50_A2RAZ1 Cluster: Complex: hRPC11 is a small; n=5;
Eurotiomycetidae|Rep: Complex: hRPC11 is a small -
Aspergillus niger
Length = 117
Score = 46.0 bits (104), Expect = 3e-04
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 90 CKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C + QLQ RS+DEPMTTF+ C CG RW+
Sbjct: 82 CNGDRAYFFQLQIRSADEPMTTFLKCTTCGARWR 115
>UniRef50_Q197A5 Cluster: Putative uncharacterized protein; n=1;
Aedes taeniorhynchus iridescent virus|Rep: Putative
uncharacterized protein - Aedes taeniorhynchus
iridescent virus
Length = 137
Score = 45.2 bits (102), Expect = 5e-04
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 72 MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
+L+CGKC + QTRS DEP T F C+ C RW
Sbjct: 97 VLRCGKCDCTKILWFSKQTRSMDEPTTIFASCSNCKTRW 135
>UniRef50_Q5CYY8 Cluster: RNA polymerase III subunit C11; n=1;
Cryptosporidium parvum Iowa II|Rep: RNA polymerase III
subunit C11 - Cryptosporidium parvum Iowa II
Length = 62
Score = 45.2 bits (102), Expect = 5e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C KC + QLQ RS+DEPMT+F C +C +WK
Sbjct: 24 CPKCSFSEAYFFQLQIRSADEPMTSFYTCVKCDFKWK 60
>UniRef50_A3LW94 Cluster: DNA-directed RNA polymerase subunit; n=10;
Fungi/Metazoa group|Rep: DNA-directed RNA polymerase
subunit - Pichia stipitis (Yeast)
Length = 111
Score = 45.2 bits (102), Expect = 5e-04
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 90 CKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C + QLQ RS+DEPMTTF C CG++WK
Sbjct: 76 CGGNKAYFFQLQIRSADEPMTTFYKCVNCGHKWK 109
>UniRef50_A2FMI1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 256
Score = 44.8 bits (101), Expect = 7e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 72 MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
+ +C +CK N T+ +QTR DEPMT F C +CG
Sbjct: 216 LFQCPRCKGNNTTHVAVQTRGGDEPMTNFCECLDCG 251
>UniRef50_Q5V537 Cluster: DNA-directed RNA-polymerase subunit M;
n=6; Halobacteriaceae|Rep: DNA-directed RNA-polymerase
subunit M - Haloarcula marismortui (Halobacterium
marismortui)
Length = 107
Score = 44.8 bits (101), Expect = 7e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKT-EMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
E I+ + + +G T + + C +C Y QT S+DEP T F C ECG+RW+
Sbjct: 47 ELIETEEGSNFEGKPTADDVTCEECGHGKAWYTIKQTGSADEPPTRFFKCQECGHRWR 104
>UniRef50_Q8SSB3 Cluster: DNA-DIRECTED RNA POLYMERASE III 12.5kDa
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep: DNA-DIRECTED
RNA POLYMERASE III 12.5kDa SUBUNIT - Encephalitozoon
cuniculi
Length = 104
Score = 44.4 bits (100), Expect = 9e-04
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 78 KCGK---CKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
KCGK C + ++ +LQTRS+DEPMT F C C WK
Sbjct: 63 KCGKRCECGSEEVSFVELQTRSADEPMTIFYKCIRCKKVWK 103
>UniRef50_O13896 Cluster: DNA-directed RNA polymerase III subunit
RPC10; n=1; Schizosaccharomyces pombe|Rep: DNA-directed
RNA polymerase III subunit RPC10 - Schizosaccharomyces
pombe (Fission yeast)
Length = 109
Score = 44.4 bits (100), Expect = 9e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 3 REKFIKEAIDDA---QLATVQGTKTEML-KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN 170
R +F ++ +DD + A +TE+ + KC + QLQ RS+DEPM+TF C
Sbjct: 41 RHEFAQKEVDDVLGGEEAFESNQQTEVTCENTKCDNNRAYFFQLQIRSADEPMSTFYRCT 100
Query: 171 ECGNRWK 191
+C +W+
Sbjct: 101 KCKFQWR 107
>UniRef50_Q9LNT2 Cluster: T20H2.16 protein; n=1; Arabidopsis
thaliana|Rep: T20H2.16 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 122
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 18 KEAIDDAQLATVQGTKTEMLK-CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
KE ID TV TE+ K C KC+ Y QTRS+DE TT+ C CG+R+
Sbjct: 65 KEIIDKNLAYTVT---TEIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRF 119
>UniRef50_Q2UH76 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
C KC K+ TY+Q+Q RS+DE T F C +CG+R
Sbjct: 88 CVKCPSKDVTYSQVQLRSADEGSTIFYNCLKCGHR 122
>UniRef50_Q7QXB3 Cluster: GLP_741_50228_49188; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_741_50228_49188 - Giardia lamblia
ATCC 50803
Length = 346
Score = 43.2 bits (97), Expect = 0.002
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 75 LKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
++C KCK++ + QTRS+DE T C+ CG+RW+
Sbjct: 306 IQCKKCKQETVVRLEKQTRSADEATTIEYTCSSCGHRWR 344
>UniRef50_UPI00015A6C95 Cluster: TFS2-M domain-containing protein
1.; n=5; Danio rerio|Rep: TFS2-M domain-containing
protein 1. - Danio rerio
Length = 374
Score = 42.7 bits (96), Expect = 0.003
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Frame = +3
Query: 3 REKFIKEAIDDAQLA-TVQGTKTEMLKCGKCKKKNCTYNQL-----------QTRSSDEP 146
RE + AI + QL TV+GT T ++C +C +C Q+ Q+ S+D
Sbjct: 293 RETYTSLAISEHQLPETVKGTPTNKVRCRQCDSMDCRVTQISRGTLFLPSWVQSGSADND 352
Query: 147 MTTFVLCNECGNRW 188
TF+ C CG +W
Sbjct: 353 SMTFMTCANCGEQW 366
>UniRef50_O96159 Cluster: Transcription factor, putative; n=5;
Plasmodium|Rep: Transcription factor, putative -
Plasmodium falciparum (isolate 3D7)
Length = 106
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 27 IDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+D + +KT+ + C KC + LQ RS+DEP T F +C +C WK
Sbjct: 52 LDAVDINNKNMSKTQAV-CPKCTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWK 105
>UniRef50_Q58548 Cluster: DNA-directed RNA polymerase subunit M;
n=9; Euryarchaeota|Rep: DNA-directed RNA polymerase
subunit M - Methanococcus jannaschii
Length = 108
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 18 KEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
KE I + ++ T ++C KC + QTR +DEP T F C +CG+ W+
Sbjct: 48 KEKITVIESEGLETLPTTRIECPKCGHNEAYWWLQQTRCADEPETRFYKCKKCGHTWR 105
>UniRef50_Q9N4B7 Cluster: DNA-directed RNA polymerase subunit; n=9;
Bilateria|Rep: DNA-directed RNA polymerase subunit -
Caenorhabditis elegans
Length = 108
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C C + QLQTRS+DEP T F C N C +RWK
Sbjct: 69 CPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWK 107
>UniRef50_Q9YEZ3 Cluster: Archaeal transcription factor S; n=2;
Thermoprotei|Rep: Archaeal transcription factor S -
Aeropyrum pernix
Length = 118
Score = 42.3 bits (95), Expect = 0.004
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+K + IDD Q K + C KC + +QTRS+DEPMT F C C
Sbjct: 56 RDKIV--VIDDETPVGAQVLKGSVT-CPKCGHDEVYFWMMQTRSADEPMTRFYRCKRCRY 112
Query: 183 RWK 191
W+
Sbjct: 113 TWR 115
>UniRef50_Q8PX24 Cluster: DNA-directed RNA polymerase subunit M;
n=3; Euryarchaeota|Rep: DNA-directed RNA polymerase
subunit M - Methanosarcina mazei (Methanosarcina frisia)
Length = 107
Score = 42.3 bits (95), Expect = 0.004
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +3
Query: 6 EKFIKEA-IDDAQLATVQGTKTEML-----KCGKCKKKNCTYNQLQTRSSDEPMTTFVLC 167
+ F+ +A IDD ++ ++G +T L KC +C + Q RS+DE T F C
Sbjct: 37 KNFVSKAKIDDHEVVVLEGEQTSGLPTTNAKCPECGNNTAAWWLRQLRSADESETRFFKC 96
Query: 168 NECGNRWK 191
+CG W+
Sbjct: 97 TKCGYTWR 104
>UniRef50_A0RXH6 Cluster: DNA-directed RNA polymerase, subunit
M/Transcription elongation factor TFIIS; n=1;
Cenarchaeum symbiosum|Rep: DNA-directed RNA polymerase,
subunit M/Transcription elongation factor TFIIS -
Cenarchaeum symbiosum
Length = 103
Score = 42.3 bits (95), Expect = 0.004
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
T ++C KC + LQTRS+DEP T F C +C + W+
Sbjct: 59 TIKIECEKCGHGEAVWWMLQTRSADEPTTQFYRCIKCSHTWR 100
>UniRef50_Q4QDH9 Cluster: RNA polymerase III C11 subunit, putative;
n=3; Leishmania|Rep: RNA polymerase III C11 subunit,
putative - Leishmania major
Length = 151
Score = 41.9 bits (94), Expect = 0.005
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 90 CKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C+ + Q+Q RS+DEP T F C ECG++W+
Sbjct: 116 CQSTKAYFIQIQMRSADEPATVFFKCVECGHQWR 149
>UniRef50_Q07271 Cluster: DNA-directed RNA polymerase subunit M;
n=4; Sulfolobaceae|Rep: DNA-directed RNA polymerase
subunit M - Sulfolobus acidocaldarius
Length = 111
Score = 41.9 bits (94), Expect = 0.005
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
T + C C + LQTRS+DEP T F C +CG W+
Sbjct: 67 TRGISCPSCGNDEAYFWILQTRSADEPATRFYKCTKCGKVWR 108
>UniRef50_Q7QQW3 Cluster: DNA-directed RNA polymerase subunit; n=2;
Giardia intestinalis|Rep: DNA-directed RNA polymerase
subunit - Giardia lamblia ATCC 50803
Length = 105
Score = 41.5 bits (93), Expect = 0.006
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
QG C C + + Q+Q RSSDEPM+ F C +C ++W+
Sbjct: 58 QGADKTQNPCPVCAFPDAFWIQMQIRSSDEPMSRFYRCCQCAHQWR 103
>UniRef50_A4R9N1 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 115
Score = 41.5 bits (93), Expect = 0.006
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C C K Y LQTR +DE T F C C +WK
Sbjct: 76 CRFCPSKTVRYTTLQTRGADEGSTVFYFCEGCSQKWK 112
>UniRef50_A7DQB3 Cluster: Transcription termination factor Tfs; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Transcription termination factor Tfs - Candidatus
Nitrosopumilus maritimus SCM1
Length = 105
Score = 41.5 bits (93), Expect = 0.006
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
T ++C KC + LQTRS+DEP T F C +C W+
Sbjct: 61 TIKIECEKCGHDEAIWWMLQTRSADEPTTQFYRCTKCQYTWR 102
>UniRef50_Q5V5C5 Cluster: DNA-directed RNA-polymerase subunit M;
n=4; Halobacteriaceae|Rep: DNA-directed RNA-polymerase
subunit M - Haloarcula marismortui (Halobacterium
marismortui)
Length = 108
Score = 41.1 bits (92), Expect = 0.008
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
E +D +++ T +C +C + Y Q R++DE T F C EC ++W+
Sbjct: 48 EVVDTSEVDAEDMGPTTGARCPECGNERAFYEMKQIRAADESETRFFTCTECEHKWR 104
>UniRef50_Q9P9I8 Cluster: Archaeal transcription factor S; n=2;
Methanococcaceae|Rep: Archaeal transcription factor S -
Methanococcus thermolithotrophicus
Length = 105
Score = 41.1 bits (92), Expect = 0.008
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
+EK + + + V T ++C C ++ QTR +DEP T F C +CG+
Sbjct: 40 KEKIEAKKQEVTVIEDVDTLPTTRIECPSCGNMEASWWLQQTRCADEPETRFYKCKKCGH 99
Query: 183 RWK 191
W+
Sbjct: 100 TWR 102
>UniRef50_Q4A328 Cluster: Transcription factor S-II (TFIIS) family
protein; n=1; Emiliania huxleyi virus 86|Rep:
Transcription factor S-II (TFIIS) family protein -
Emiliania huxleyi virus 86
Length = 150
Score = 40.7 bits (91), Expect = 0.011
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 9 KFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
K + + +++ +A+++ + + C KC QTRS+DE T F C +C +W
Sbjct: 90 KMLYDKVEEGSVASMK--QKAAITCNKCGSSEILMAMAQTRSADEGTTMFFRCVKCNQKW 147
Query: 189 K 191
K
Sbjct: 148 K 148
>UniRef50_Q6EU09 Cluster: DNA-directed RNA polymerase subunit; n=3;
Oryza sativa|Rep: DNA-directed RNA polymerase subunit -
Oryza sativa subsp. japonica (Rice)
Length = 110
Score = 40.7 bits (91), Expect = 0.011
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C +C+ Y Q+Q RS+DEPM+TF C EC W+
Sbjct: 70 CPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWR 108
>UniRef50_A3DM83 Cluster: Transcription factor S; n=1;
Staphylothermus marinus F1|Rep: Transcription factor S -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 104
Score = 40.3 bits (90), Expect = 0.015
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
T + C KC Y +QTR++DEP T F C CG W+
Sbjct: 60 TREVTCPKCGYHEAYYWIVQTRAADEPPTRFYKCRRCGYVWR 101
>UniRef50_A0CNA6 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 39.9 bits (89), Expect = 0.019
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Frame = +3
Query: 9 KFIKEAIDDAQLATVQG-TKTEM-----LKCGKC-KKKNCTYNQLQTRSSDEPMTTFVLC 167
+ IKE ++ Q+ + +K EM C C +KK ++ QTR+SDEP T F C
Sbjct: 246 RIIKEKMEAEQIGFYKDLSKREMEGIEGKTCKGCGQKKVYLVDEKQTRASDEPTTKFFEC 305
Query: 168 NECGNRWKFC 197
CG++++ C
Sbjct: 306 YNCGDKFRIC 315
>UniRef50_P32529 Cluster: DNA-directed RNA polymerase I subunit
RPA12; n=12; Saccharomycetales|Rep: DNA-directed RNA
polymerase I subunit RPA12 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 125
Score = 39.9 bits (89), Expect = 0.019
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
KC +C + Y+ LQ RS+DE T F C CG +++
Sbjct: 85 KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFR 122
>UniRef50_A4RUS3 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 120
Score = 39.5 bits (88), Expect = 0.025
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C C + Q+Q RS+DEPM+ F C +C +W+
Sbjct: 82 CPGCAHDEAYFMQIQIRSADEPMSVFYKCVKCARQWR 118
>UniRef50_Q0W2J5 Cluster: Archaeal transcription factor S; n=4;
Euryarchaeota|Rep: Archaeal transcription factor S -
Uncultured methanogenic archaeon RC-I
Length = 106
Score = 39.5 bits (88), Expect = 0.025
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
RE + + DA L T TE +KC C + + Q RS+DE F C ECG
Sbjct: 46 REITVLDEKQDAGLPT-----TEEVKCPDCGNQKAYWWMRQLRSADESEVRFFRCTECGK 100
Query: 183 RWK 191
W+
Sbjct: 101 TWR 103
>UniRef50_Q9J5C0 Cluster: DNA-directed RNA polymerase 30 kDa
polypeptide; n=14; Chordopoxvirinae|Rep: DNA-directed
RNA polymerase 30 kDa polypeptide - Fowlpox virus (FPV)
Length = 182
Score = 39.5 bits (88), Expect = 0.025
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 75 LKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
++C CK N LQTRSSDE T V+C +CG +
Sbjct: 137 IRCVACKSNNTIPMILQTRSSDEEPTVRVVCKDCGKNF 174
>UniRef50_UPI00006C17FE Cluster: PREDICTED: similar to polymerase
(RNA) III (DNA directed) polypeptide K; n=3;
Catarrhini|Rep: PREDICTED: similar to polymerase (RNA)
III (DNA directed) polypeptide K - Homo sapiens
Length = 66
Score = 39.1 bits (87), Expect = 0.034
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
Q + L C C + T+ +LQT S+DEP TTF C +CG+ W+
Sbjct: 19 QRCRCHSLACNTCLCVHFTH-KLQTHSADEPKTTFYQCCRTQCGHHWR 65
>UniRef50_Q15ES4 Cluster: RNA polymerase III subunit C11-like
protein; n=2; Schistosoma|Rep: RNA polymerase III
subunit C11-like protein - Schistosoma mansoni (Blood
fluke)
Length = 115
Score = 39.1 bits (87), Expect = 0.034
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
KC KC + Q+QTRS+DEP T C +C + W
Sbjct: 76 KCPKCSHTRAYFVQMQTRSADEPSTIKYSCIKCHHIW 112
>UniRef50_UPI0000F328A1 Cluster: UPI0000F328A1 related cluster; n=1;
Bos taurus|Rep: UPI0000F328A1 UniRef100 entry - Bos
Taurus
Length = 276
Score = 38.7 bits (86), Expect = 0.045
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +3
Query: 3 REKFIKEAIDDAQLA-TVQGTKTEMLKCGKCKKKNCTY-----NQLQTRSSDEPMTTFVL 164
R ++K A+ + L V+GT T +K C+K NC ++ DE M T+V+
Sbjct: 207 RASYMKSALQEHYLPQVVEGTPTRKIKYEGCEKFNCQVTVVPRGWVRNPGPDEEMMTYVI 266
Query: 165 CNECGNRW 188
CN+ G +W
Sbjct: 267 CND-GKQW 273
>UniRef50_Q9LU97 Cluster: Similarity to transcription-associated
zinc ribbon protein; n=2; Arabidopsis thaliana|Rep:
Similarity to transcription-associated zinc ribbon
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 119
Score = 38.7 bits (86), Expect = 0.045
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
C KC+ Y QTRS+DE TT+ C C +R+
Sbjct: 81 CEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRF 116
>UniRef50_A7D318 Cluster: Transcription factor TFIIS; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Transcription
factor TFIIS - Halorubrum lacusprofundi ATCC 49239
Length = 108
Score = 38.7 bits (86), Expect = 0.045
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
E ++ + D A +G C +C + Q RS+DE T F +C EC ++
Sbjct: 43 ESQVESEVIDVSDAEDKGLPKTTAHCPECGNDRAYWYMQQIRSADESETRFFVCTECEHK 102
Query: 186 WK 191
W+
Sbjct: 103 WR 104
>UniRef50_Q5KKH5 Cluster: DNA-directed RNA polymerase subunit; n=1;
Filobasidiella neoformans|Rep: DNA-directed RNA
polymerase subunit - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 132
Score = 38.3 bits (85), Expect = 0.059
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
+ ++ +D + A +G KC KC +Y ++Q RS+DE T F C CG+
Sbjct: 69 KRALVQNKLDAGEAA--KGRDPAQEKCQKCGHIGLSYKEMQLRSADEGSTIFYKCLNCGD 126
Query: 183 R 185
+
Sbjct: 127 Q 127
>UniRef50_Q01C33 Cluster: RNA polymerase III subunit C11; n=2;
Ostreococcus|Rep: RNA polymerase III subunit C11 -
Ostreococcus tauri
Length = 136
Score = 37.9 bits (84), Expect = 0.078
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
KC KCK K + +Q RS+DE T F C +C +
Sbjct: 96 KCPKCKHKGLNFYTMQLRSADEGQTVFYECPKCNH 130
>UniRef50_Q91FH5 Cluster: 349L; n=1; Invertebrate iridescent virus
6|Rep: 349L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 140
Score = 37.5 bits (83), Expect = 0.10
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 6 EKFIK-EAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
E+F+K E +D L + +KC KC + QTRS DE + F LC+ C +
Sbjct: 78 EQFLKIEKEEDNFLESPLEVAEGAIKC-KCGSERVFSFSKQTRSGDESTSVFALCSSCKS 136
Query: 183 RW 188
+W
Sbjct: 137 KW 138
>UniRef50_Q4N7G2 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 252
Score = 37.5 bits (83), Expect = 0.10
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 36 AQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
A+ A G +T C KC Y+ Q RS+DE M+ C +C NR
Sbjct: 198 AKTANKSGKQTVKYNCEKCGHDTHLYSTFQARSADEGMSIMYECIKCKNR 247
>UniRef50_A2EHZ7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 126
Score = 37.5 bits (83), Expect = 0.10
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 EKFIKEAIDDAQLATVQGTKTEMLK--CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
EK +K + ++ + QG ++K C +C ++ + Q RS+DE T F C CG
Sbjct: 60 EKTVKIVKEADEITSKQGLARSIIKEKCPECGEEGLYFTTAQIRSADEGQTIFYECIHCG 119
Query: 180 NRW 188
R+
Sbjct: 120 YRF 122
>UniRef50_O17587 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 119
Score = 37.1 bits (82), Expect = 0.14
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 176
C KC +Y+ +QTRS+DE T F C +C
Sbjct: 80 CTKCGHSKASYSTMQTRSADEGQTVFYTCLKC 111
>UniRef50_A0DS61 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 300
Score = 37.1 bits (82), Expect = 0.14
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 81 CGKCKKKNCTY-NQLQTRSSDEPMTTFVLCNECG 179
C C +K N++QTR+SDEP T F C CG
Sbjct: 260 CNNCGQKQMKLVNEIQTRASDEPSTKFYECLNCG 293
>UniRef50_Q8ZTX9 Cluster: DNA-directed RNA polymerase subunit M;
n=7; Thermoprotei|Rep: DNA-directed RNA polymerase
subunit M - Pyrobaculum aerophilum
Length = 110
Score = 37.1 bits (82), Expect = 0.14
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
K + C KC QTR++DEP T F C +CG W+
Sbjct: 65 KVKTRGCPKCGHDEAYVWVQQTRAADEPPTRFYRCTKCGYTWR 107
>UniRef50_A1RXU9 Cluster: Transcription termination factor Tfs; n=1;
Thermofilum pendens Hrk 5|Rep: Transcription termination
factor Tfs - Thermofilum pendens (strain Hrk 5)
Length = 109
Score = 37.1 bits (82), Expect = 0.14
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 176
KC C +LQTR+ DEP T F +C +C
Sbjct: 69 KCENCGNDKAYVYELQTRAGDEPATRFYICTKC 101
>UniRef50_A0B7Y7 Cluster: Transcription factor TFIIS; n=1;
Methanosaeta thermophila PT|Rep: Transcription factor
TFIIS - Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 85
Score = 36.7 bits (81), Expect = 0.18
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 57 GTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
G T KC +C + Q R++DE F C +CGN W+
Sbjct: 38 GLPTTKAKCPECGNDTAYWWLRQLRAADESEVRFFRCTKCGNTWR 82
>UniRef50_O94703 Cluster: DNA-directed RNA polymerase I subunit
RPA12; n=1; Schizosaccharomyces pombe|Rep: DNA-directed
RNA polymerase I subunit RPA12 - Schizosaccharomyces
pombe (Fission yeast)
Length = 119
Score = 36.7 bits (81), Expect = 0.18
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
KC KC + T++ LQ RS+DE T F C C ++
Sbjct: 79 KCPKCGNDHMTFHTLQLRSADEGSTVFYECPRCAYKF 115
>UniRef50_Q4T1I2 Cluster: Chromosome undetermined SCAF10575, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10575,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 147
Score = 36.3 bits (80), Expect = 0.24
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 24 AIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
A+ + + + +QG + +C +C K+ Y+ Q RS+DE T F C C R
Sbjct: 72 AVVEEEDSDLQGPVIDR-RCVRCNKEGMVYHTRQMRSADEGQTVFFTCVHCRRR 124
>UniRef50_Q9VD81 Cluster: DNA-directed RNA polymerase subunit; n=8;
Endopterygota|Rep: DNA-directed RNA polymerase subunit -
Drosophila melanogaster (Fruit fly)
Length = 120
Score = 36.3 bits (80), Expect = 0.24
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 176
KC KC +Y LQ RS+DE T F C +C
Sbjct: 80 KCPKCNHDKMSYATLQLRSADEGQTVFFTCLKC 112
>UniRef50_Q7QY69 Cluster: GLP_572_32225_32536; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_572_32225_32536 - Giardia lamblia
ATCC 50803
Length = 103
Score = 35.9 bits (79), Expect = 0.31
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C KC Y +Q RS+DE T F C CG++++
Sbjct: 64 CPKCHHGQAYYASMQMRSADEGQTIFFECCSCGHKYR 100
>UniRef50_A0CQT2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 35.9 bits (79), Expect = 0.31
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+C KC + + QTR +DE T C +CG++WK
Sbjct: 64 QCDKCGCLKAFFWEFQTRGADEQSTISFECIKCGHKWK 101
>UniRef50_Q8SRA1 Cluster: DNA-DIRECTED RNA POLYMERASE I SUBUNIT M;
n=1; Encephalitozoon cuniculi|Rep: DNA-DIRECTED RNA
POLYMERASE I SUBUNIT M - Encephalitozoon cuniculi
Length = 99
Score = 35.9 bits (79), Expect = 0.31
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 51 VQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
VQG K + +C C + YN Q RS+DE T F C +CG R
Sbjct: 52 VQGAKIKH-RCPACGAEEMMYNTAQLRSTDEGQTVFYSC-KCGYR 94
>UniRef50_Q2NEY4 Cluster: RpoM2; n=2; Methanobacteriaceae|Rep: RpoM2
- Methanosphaera stadtmanae (strain DSM 3091)
Length = 105
Score = 35.9 bits (79), Expect = 0.31
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C +C + + +Q SDE T F C +CGN W+
Sbjct: 66 CYRCGNRELEWWMVQMHRSDEAETRFYRCTKCGNTWR 102
>UniRef50_P33796 Cluster: DNA-directed RNA polymerase 30 kDa
polypeptide; n=33; Poxviridae|Rep: DNA-directed RNA
polymerase 30 kDa polypeptide - Variola virus
Length = 259
Score = 35.9 bits (79), Expect = 0.31
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C CK +N T +QTR++DEP C +C +K
Sbjct: 159 CPNCKSRNTTPMMIQTRAADEPPLVRHACRDCKQHFK 195
>UniRef50_P36958 Cluster: DNA-directed RNA polymerase II subunit
RPB9; n=9; Coelomata|Rep: DNA-directed RNA polymerase II
subunit RPB9 - Drosophila melanogaster (Fruit fly)
Length = 129
Score = 35.5 bits (78), Expect = 0.42
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRW 188
+TE C KC + + Q QTR ++E M + +C C +RW
Sbjct: 84 RTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 127
>UniRef50_Q6TVG7 Cluster: ORF021 RNA polymerase subunit RPO30; n=1;
Bovine papular stomatitis virus|Rep: ORF021 RNA
polymerase subunit RPO30 - Bovine papular stomatitis
virus
Length = 199
Score = 35.1 bits (77), Expect = 0.55
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 75 LKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG---NRWKFC 197
L C C+ KN +QTRS+DEP C C N KFC
Sbjct: 142 LPCPSCRSKNTMPMMIQTRSADEPPLIKYACKNCQKSFNPPKFC 185
>UniRef50_Q4KSC5 Cluster: Transcription elongation factor SII; n=2;
Infectious spleen and kidney necrosis virus|Rep:
Transcription elongation factor SII - Orange-spotted
grouper iridovirus
Length = 73
Score = 35.1 bits (77), Expect = 0.55
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTE-MLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
++ + KEA D T + T+ C C +QTR DE ++ FV C CG
Sbjct: 9 KDLYDKEAEQDRVARTRFSSLTQSQYPCRACGNAKTYTLTMQTRGGDEALSVFVCCVACG 68
Query: 180 NRWK 191
R++
Sbjct: 69 KRYR 72
>UniRef50_Q54NX7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1183
Score = 34.7 bits (76), Expect = 0.73
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1
Query: 320 NNAFIFARNQIIVNVIKHMILKMYHYSKYLNHLSRL 213
NN + N+II+N+IK+ + K + Y+ Y N + +L
Sbjct: 700 NNNNLLKPNEIIINIIKNQLFKSFSYTLYFNLIEKL 735
>UniRef50_Q2P9W0 Cluster: RNA polymerase I subunit RPA12; n=2;
Trypanosoma brucei|Rep: RNA polymerase I subunit RPA12 -
Trypanosoma brucei brucei
Length = 151
Score = 34.7 bits (76), Expect = 0.73
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 30 DDAQLATVQGTKTEMLKCGKCK-KKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+D +A E C KC + C Q RS+DE T F C C + W+
Sbjct: 94 EDVGVAQTDNRVEEEAFCEKCGVPRKCKVFARQIRSADEGQTVFYQCTSCDSEWQ 148
>UniRef50_UPI00006600EC Cluster: DNA-directed RNA polymerase I
subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I
small-specific subunit Rpa12) (Zinc ribbon domain-
containing protein 1).; n=1; Takifugu rubripes|Rep:
DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6)
(Nuclear RNA polymerase I small-specific subunit Rpa12)
(Zinc ribbon domain- containing protein 1). - Takifugu
rubripes
Length = 140
Score = 34.3 bits (75), Expect = 0.96
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 176
+C +C K+ Y+ Q RS+DE T F C C
Sbjct: 100 RCLRCNKEGMVYHTRQMRSADEGQTVFFTCIHC 132
>UniRef50_Q98TK0 Cluster: RNA polymerase III smallest subunit; n=1;
Platichthys flesus|Rep: RNA polymerase III smallest
subunit - Platichthys flesus (European flounder)
Length = 87
Score = 34.3 bits (75), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTF 158
C C + Q+QTRS+DEPMTTF
Sbjct: 60 CPTCGHLRAYFMQIQTRSADEPMTTF 85
>UniRef50_A7ARU9 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 256
Score = 34.3 bits (75), Expect = 0.96
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
C C + Y+ Q RS+DE MT C C NR
Sbjct: 217 CDNCGFEEAYYSTFQARSADEGMTVMYECKRCKNR 251
>UniRef50_Q2H0C1 Cluster: DNA-directed RNA polymerase subunit; n=2;
Sordariales|Rep: DNA-directed RNA polymerase subunit -
Chaetomium globosum (Soil fungus)
Length = 139
Score = 34.3 bits (75), Expect = 0.96
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
+C KC K Y+++Q RS+DE T C +CG R
Sbjct: 83 ECPKCGKTGIRYSEVQQRSADEGSTIIYNC-DCGER 117
>UniRef50_UPI00006CB60F Cluster: hypothetical protein
TTHERM_00444250; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00444250 - Tetrahymena
thermophila SB210
Length = 108
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 60 TKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
T +M+ C C+K+ Q RS DE T +C C + WK
Sbjct: 63 TDKDMI-CPACEKRGAYIRLEQDRSLDEGQTQHYICKNCSHTWK 105
>UniRef50_Q8L5V0 Cluster: RNA Polymerase II subunit 14.5 kD,
putative; n=9; Magnoliophyta|Rep: RNA Polymerase II
subunit 14.5 kD, putative - Arabidopsis thaliana
(Mouse-ear cress)
Length = 114
Score = 33.9 bits (74), Expect = 1.3
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN-ECGNRWK 191
+T+ ++C KC+ + Q R + FV CN C +RW+
Sbjct: 70 RTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWR 113
>UniRef50_Q5DGH5 Cluster: SJCHGC08580 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08580 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 33.9 bits (74), Expect = 1.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
+C C Y LQTRS+DE T C +C +
Sbjct: 76 ECAYCGNDRMVYVTLQTRSADEGQTVIYTCTQCAKK 111
>UniRef50_Q4P4T4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 147
Score = 33.9 bits (74), Expect = 1.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
KC C ++ LQ RS+DE T F C +CG ++
Sbjct: 107 KCPGCGNDEMNFHTLQLRSADEGTTVFYDCPKCGYKF 143
>UniRef50_O27369 Cluster: DNA-directed RNA polymerase subunit M;
n=6; Euryarchaeota|Rep: DNA-directed RNA polymerase
subunit M - Methanobacterium thermoautotrophicum
Length = 104
Score = 33.9 bits (74), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
T ++C KC + QTR +DE T F C C + W+
Sbjct: 60 TTRVECPKCGNMEAFWWLQQTRRADESETRFFRCTRCKHTWR 101
>UniRef50_UPI000049984E Cluster: DNA-directed RNA polymerase I
subunit; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
DNA-directed RNA polymerase I subunit - Entamoeba
histolytica HM-1:IMSS
Length = 122
Score = 33.5 bits (73), Expect = 1.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNR 185
KC C + Y+ Q RS DE T + C CG++
Sbjct: 82 KCPNCGNETMHYHSAQVRSVDEGQTVYYECPNCGHQ 117
>UniRef50_Q9LNK0 Cluster: DNA-directed RNA polymerase subunit; n=3;
Arabidopsis thaliana|Rep: DNA-directed RNA polymerase
subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 106
Score = 33.5 bits (73), Expect = 1.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C +C + +Q RS+DEP + F C +C W+
Sbjct: 68 CPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWR 104
>UniRef50_Q0DP65 Cluster: Os03g0711700 protein; n=4; Oryza
sativa|Rep: Os03g0711700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 156
Score = 33.5 bits (73), Expect = 1.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 176
+C KCK Y Q RS+DE T F C C
Sbjct: 116 ECEKCKNPELQYYTKQLRSADEGQTVFYKCANC 148
>UniRef50_Q55GG8 Cluster: DNA-directed RNA polymerase subunit; n=1;
Dictyostelium discoideum AX4|Rep: DNA-directed RNA
polymerase subunit - Dictyostelium discoideum AX4
Length = 112
Score = 33.5 bits (73), Expect = 1.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
+T+ KC C + + Q T ++ MT F +C CG RW
Sbjct: 67 RTKAAKCPSCGGREAAFFQSMTAANG--MTLFYVCASCGERW 106
>UniRef50_A2F9H5 Cluster: Putative uncharacterized protein; n=4;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2069
Score = 33.1 bits (72), Expect = 2.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 120 VDCRYSSSFCICHILTFLFWCLELWQAV 37
+ C S +FC+ H+L +L +CLEL + V
Sbjct: 310 IRCLKSDTFCLAHVLFYLCYCLELIRVV 337
>UniRef50_A0DQ53 Cluster: Chromosome undetermined scaffold_6, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_6, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1501
Score = 33.1 bits (72), Expect = 2.2
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2
Query: 385 IILLNFKLKNHLIYTQ*LSMTVIMHLYLQETKS 287
II N KLK+HL T VI+HLY+QE KS
Sbjct: 1211 IIRPNQKLKDHLNITWKFHQGVIVHLYVQELKS 1243
>UniRef50_UPI0000F2BA0A Cluster: PREDICTED: similar to zinc finger
protein 91; n=2; Monodelphis domestica|Rep: PREDICTED:
similar to zinc finger protein 91 - Monodelphis
domestica
Length = 1114
Score = 32.7 bits (71), Expect = 2.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKF 194
KC +C+K T +LQT P CNECG +++
Sbjct: 457 KCNECEKAFGTIARLQTHKLVHPGEKHFECNECGKGFRY 495
>UniRef50_Q22YI7 Cluster: Transporter, cation channel family; n=2;
Tetrahymena thermophila SB210|Rep: Transporter, cation
channel family - Tetrahymena thermophila SB210
Length = 1427
Score = 32.7 bits (71), Expect = 2.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 35 CTACHSSRHQNRNVKMWQMQKEELYLQSTTNKK 133
C CHS HQ+ N K+ K ++Y+ + N++
Sbjct: 1099 CNFCHSFFHQDLNCKLVNFDKNQIYISQSVNQQ 1131
>UniRef50_A0BJ84 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 32.7 bits (71), Expect = 2.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 78 KCGKC-KKKNCTYNQLQTRSSDEPMTTFVLCNECGNRW 188
+C C +KK + QTR +DEP T F C CG+++
Sbjct: 257 QCKGCHQKKVYLVEEKQTRCADEPTTKFFECFNCGDKF 294
>UniRef50_Q2UPH8 Cluster: Zn-finger protein; n=2;
Pezizomycotina|Rep: Zn-finger protein - Aspergillus
oryzae
Length = 269
Score = 32.7 bits (71), Expect = 2.9
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKTEMLKCGKCKK-KNCTY--NQLQTRSSDEPMTTFVLCNECGN--- 182
E ++A L + L+C CKK C + ++++ D P T +LC CG+
Sbjct: 12 EEFEEACLGCRHYKRNVKLQCYACKKWYTCRFCHDEVEDHHLDRPKTENMLCMLCGHAQP 71
Query: 183 RWKFC*DCSKQS 218
+FC C +QS
Sbjct: 72 ATQFCRQCGEQS 83
>UniRef50_Q0CCS2 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 696
Score = 32.7 bits (71), Expect = 2.9
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +3
Query: 21 EAIDDAQLATVQGTKTEMLKCGKCKK-KNCTY--NQLQTRSSDEPMTTFVLCNECGN--- 182
E +++AQL + L+C CKK C + ++++ D P T +LC CG+
Sbjct: 286 EEVEEAQLGCQHYKRNVKLQCYACKKWYTCRFCHDEVEDHHLDRPKTENMLCMLCGHPQP 345
Query: 183 RWKFC*DCSKQS 218
+ C C +Q+
Sbjct: 346 AAQACRSCGEQA 357
>UniRef50_Q8GSD5 Cluster: Putative RNA Polymerase II subunit 14.5
kD; n=1; Oryza sativa (japonica cultivar-group)|Rep:
Putative RNA Polymerase II subunit 14.5 kD - Oryza
sativa subsp. japonica (Rice)
Length = 116
Score = 32.3 bits (70), Expect = 3.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN-ECGNRWK 191
+T +KC C + Q T+ F+ CN CG+RW+
Sbjct: 72 RTRSIKCYNCGHPEAAFFQAPTKGEKGLTLYFICCNPSCGHRWR 115
>UniRef50_Q4Q100 Cluster: Transcription factor S-II-like protein;
n=3; Leishmania|Rep: Transcription factor S-II-like
protein - Leishmania major
Length = 254
Score = 32.3 bits (70), Expect = 3.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 36 AQLATVQGTKTEMLKCGKCK-KKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
A + V E C C + C QTRS+DE T F C +C + W+
Sbjct: 199 AGITEVDNRIIEEAFCEMCGVHRPCKTFARQTRSADEGQTIFFQCTKCSSEWQ 251
>UniRef50_A0E7M3 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 118
Score = 31.9 bits (69), Expect = 5.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
C KC + ++ Q RS+DE T F C +C R++
Sbjct: 79 CPKCSHEEAYFSTAQLRSADEGSTVFYECVKCQFRYQ 115
>UniRef50_Q6C1C2 Cluster: DNA-directed RNA polymerase subunit; n=1;
Yarrowia lipolytica|Rep: DNA-directed RNA polymerase
subunit - Yarrowia lipolytica (Candida lipolytica)
Length = 100
Score = 31.9 bits (69), Expect = 5.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 78 KCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
+C KC + + + Q Q + ++ M F +CN C N
Sbjct: 62 ECPKCHEHDVVFFQSQQKRAETTMILFFVCNNCNN 96
>UniRef50_Q55895 Cluster: Serum resistance locus; BrkB; n=1;
Synechocystis sp. PCC 6803|Rep: Serum resistance locus;
BrkB - Synechocystis sp. (strain PCC 6803)
Length = 318
Score = 31.5 bits (68), Expect = 6.8
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -1
Query: 320 NNAFIFARNQIIVNVIKHMILKMYHYSKYLNHLSRLFRAVLAKFPAITTFITKDKCG 150
++AF F RN+I+ ++ + ++ S + N +++F VLA+F ++T D G
Sbjct: 151 HHAFNFIRNKILAFLLVLSTVMVFLLSIFANLAAKIFLTVLAEFGQSIPWVTFDSLG 207
>UniRef50_Q5DAX2 Cluster: SJCHGC05867 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05867 protein - Schistosoma
japonicum (Blood fluke)
Length = 126
Score = 31.5 bits (68), Expect = 6.8
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--ECGNRW 188
+TE C +C K+ + Q QT ++E M + +C EC ++W
Sbjct: 81 RTEDHICRRCGKQEAVFFQSQTLKAEENMRLYYVCTNVECLHKW 124
>UniRef50_P36954 Cluster: DNA-directed RNA polymerase II subunit
RPB9; n=18; Eumetazoa|Rep: DNA-directed RNA polymerase
II subunit RPB9 - Homo sapiens (Human)
Length = 125
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--ECGNRW 188
+TE C KC K + Q + +++ M + +C CG+RW
Sbjct: 80 RTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>UniRef50_P53181 Cluster: Putative uncharacterized protein YGL042C;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YGL042C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 101
Score = 31.1 bits (67), Expect = 8.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 180 YHIHYKGQMWS*VHRNFLFVVDCRYSSSFCICHI 79
YH+ + + WS VH LF +D + SS I H+
Sbjct: 68 YHMLHMYRKWSMVHPQILFAIDSKIPSSLYIYHM 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,208,090
Number of Sequences: 1657284
Number of extensions: 5946495
Number of successful extensions: 17981
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 17306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17959
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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