Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30f09
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation ... 111 9e-25
X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation ... 111 9e-25
M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation ... 111 9e-25
CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein. 111 9e-25
BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongatio... 111 9e-25
BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongatio... 111 9e-25
D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation ... 111 1e-24
CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein. 111 1e-24
BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongatio... 111 1e-24
AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongatio... 111 1e-24
AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongatio... 111 1e-24
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 110 2e-24
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 110 2e-24
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 110 2e-24
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 110 2e-24
X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation ... 107 1e-23
AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongatio... 105 8e-23
AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongatio... 53 4e-07
Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA... 50 3e-06
DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA polyme... 50 3e-06
BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (D... 50 3e-06
AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed R... 50 3e-06
AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein. 50 3e-06
AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subu... 50 3e-06
AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subu... 50 3e-06
AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens ... 48 2e-05
U35376-1|AAA79179.1| 595|Homo sapiens repressor transcriptional... 32 0.65
U09847-1|AAC50263.1| 239|Homo sapiens zinc finger protein protein. 32 0.65
BC131762-1|AAI31763.1| 172|Homo sapiens ZNF138 protein protein. 32 0.65
BC047646-1|AAH47646.1| 536|Homo sapiens ZNF85 protein protein. 32 0.65
Z23102-1|CAA80649.1| 125|Homo sapiens RNA Polymerase II subunit... 31 1.1
BC067794-1|AAH67794.1| 125|Homo sapiens polymerase (RNA) II (DN... 31 1.1
BC017112-1|AAH17112.1| 125|Homo sapiens polymerase (RNA) II (DN... 31 1.1
AD001527-2|AAB51181.1| 125|Homo sapiens HUMAN DNA-DIRECTED RNA ... 31 1.1
D70831-1|BAA24050.1| 395|Homo sapiens Zinc-finger protein protein. 31 2.0
BC047243-1|AAH47243.1| 783|Homo sapiens zinc finger protein 107... 29 4.6
AB027251-1|BAA85623.1| 783|Homo sapiens zinc finger protein (ZF... 29 4.6
BC063818-1|AAH63818.1| 504|Homo sapiens ZNF273 protein protein. 29 6.0
AY438646-1|AAR14184.1| 475|Homo sapiens zinc finger protein 383... 29 6.0
AK093182-1|BAC04086.1| 475|Homo sapiens protein ( Homo sapiens ... 29 6.0
AL159168-4|CAH73468.1| 744|Homo sapiens zinc finger protein 483... 29 8.0
AB075842-1|BAB85548.1| 746|Homo sapiens KIAA1962 protein protein. 29 8.0
>X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 111 bits (267), Expect = 9e-25
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 237 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 296
Query: 183 RWKFC 197
RWKFC
Sbjct: 297 RWKFC 301
>X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation
factor protein.
Length = 280
Score = 111 bits (267), Expect = 9e-25
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 216 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 275
Query: 183 RWKFC 197
RWKFC
Sbjct: 276 RWKFC 280
>M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation
factor SII protein.
Length = 301
Score = 111 bits (267), Expect = 9e-25
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 237 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 296
Query: 183 RWKFC 197
RWKFC
Sbjct: 297 RWKFC 301
>CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein.
Length = 301
Score = 111 bits (267), Expect = 9e-25
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 237 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 296
Query: 183 RWKFC 197
RWKFC
Sbjct: 297 RWKFC 301
>BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 111 bits (267), Expect = 9e-25
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 237 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 296
Query: 183 RWKFC 197
RWKFC
Sbjct: 297 RWKFC 301
>BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 111 bits (267), Expect = 9e-25
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEPMTTFV+CNECGN
Sbjct: 237 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 296
Query: 183 RWKFC 197
RWKFC
Sbjct: 297 RWKFC 301
>D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation
factor S-II, hS-II-T1 protein.
Length = 299
Score = 111 bits (266), Expect = 1e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 235 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 294
Query: 183 RWKFC 197
RWKFC
Sbjct: 295 RWKFC 299
>CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein.
Length = 299
Score = 111 bits (266), Expect = 1e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 235 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 294
Query: 183 RWKFC 197
RWKFC
Sbjct: 295 RWKFC 299
>BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 111 bits (266), Expect = 1e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 235 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 294
Query: 183 RWKFC 197
RWKFC
Sbjct: 295 RWKFC 299
>AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 272
Score = 111 bits (266), Expect = 1e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 208 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 267
Query: 183 RWKFC 197
RWKFC
Sbjct: 268 RWKFC 272
>AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 111 bits (266), Expect = 1e-24
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 235 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 294
Query: 183 RWKFC 197
RWKFC
Sbjct: 295 RWKFC 299
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 110 bits (264), Expect = 2e-24
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++ +C KCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 284 RNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 343
Query: 183 RWKFC 197
RWKFC
Sbjct: 344 RWKFC 348
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 110 bits (264), Expect = 2e-24
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++ +C KCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 284 RNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 343
Query: 183 RWKFC 197
RWKFC
Sbjct: 344 RWKFC 348
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 110 bits (264), Expect = 2e-24
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++ +C KCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 284 RNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 343
Query: 183 RWKFC 197
RWKFC
Sbjct: 344 RWKFC 348
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 110 bits (264), Expect = 2e-24
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R +EAI + Q+A GT T++ +C KCKKKNCTYNQ+QTRS+DEPMTTFVLCNECGN
Sbjct: 256 RNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 315
Query: 183 RWKFC 197
RWKFC
Sbjct: 316 RWKFC 320
>X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 107 bits (258), Expect = 1e-23
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +3
Query: 18 KEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
KEAI + Q+A GT+T++ CGKCKKKNCTY Q+QTRS+DEP+TTFV+CNECGNRWKFC
Sbjct: 242 KEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRWKFC 301
>AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 270
Score = 105 bits (251), Expect = 8e-23
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q+QTRSSDEPMTTFV+CNECGN
Sbjct: 208 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGN 267
Query: 183 RWK 191
RWK
Sbjct: 268 RWK 270
>AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 246
Score = 52.8 bits (121), Expect = 4e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQ 119
R+ KEAI + Q+A GT+T++ CGKC+KKNCTY Q
Sbjct: 208 RKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQ 246
>Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA
polymerases III 12.5 kDa polypeptide protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed RNA
polymerase III C11 subunit protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subunit
protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subunit
CII protein.
Length = 108
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C KC+ + QLQTRS+DEPMTTF C +CG+RW+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWR 107
>AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ39713 fis, clone SMINT2013170, weakly similar to
TRANSCRIPTION FACTOR S-II-RELATED PROTEIN 4. ).
Length = 217
Score = 47.6 bits (108), Expect = 2e-05
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATV-QGTKTEMLKCGKCKKKNCTYNQLQ---------TRSS--DEP 146
R + + I + L V GT+T +KC +C+K NC + R+S DE
Sbjct: 137 RASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQ 196
Query: 147 MTTFVLCNECGNRW 188
M T+V+CNECG +W
Sbjct: 197 MMTYVICNECGEQW 210
>U35376-1|AAA79179.1| 595|Homo sapiens repressor transcriptional
factor protein.
Length = 595
Score = 32.3 bits (70), Expect = 0.65
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 6 EKFIKEA--IDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
+K++K A ++ ++ TK + KC KC K + L S F C ECG
Sbjct: 149 DKYVKVAHKFSNSNRHEIRHTKKKPFKCTKCGKSFGMISCLTEHSRIHTRVNFYKCEECG 208
Query: 180 NRWKFC*DCSKQSR 221
+ + +K R
Sbjct: 209 KAFNWSSTLTKHKR 222
>U09847-1|AAC50263.1| 239|Homo sapiens zinc finger protein protein.
Length = 239
Score = 32.3 bits (70), Expect = 0.65
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +3
Query: 51 VQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
++ T+ + +C +C K C ++L F C ECG + + + SK +
Sbjct: 81 IRHTENKHFRCKECDKSLCMLSRLTQHKKIHTRENFYKCEECGKTFNWSTNLSKPKK 137
>BC131762-1|AAI31763.1| 172|Homo sapiens ZNF138 protein protein.
Length = 172
Score = 32.3 bits (70), Expect = 0.65
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +3
Query: 51 VQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
++ T+ + +C +C K C ++L F C ECG + + + SK +
Sbjct: 12 IRHTENKHFRCKECDKSLCMLSRLTQHKKIHTRENFYKCEECGKTFNWSTNLSKPKK 68
>BC047646-1|AAH47646.1| 536|Homo sapiens ZNF85 protein protein.
Length = 536
Score = 32.3 bits (70), Expect = 0.65
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 6 EKFIKEA--IDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
+K++K A ++ ++ TK + KC KC K + L S F C ECG
Sbjct: 90 DKYVKVAHKFSNSNRHEIRHTKKKPFKCTKCGKSFGMISCLTEHSRIHTRVNFYKCEECG 149
Query: 180 NRWKFC*DCSKQSR 221
+ + +K R
Sbjct: 150 KAFNWSSTLTKHKR 163
>Z23102-1|CAA80649.1| 125|Homo sapiens RNA Polymerase II subunit
14.5 kD protein.
Length = 125
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--ECGNRW 188
+TE C KC K + Q + +++ M + +C CG+RW
Sbjct: 80 RTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>BC067794-1|AAH67794.1| 125|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide I, 14.5kDa protein.
Length = 125
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--ECGNRW 188
+TE C KC K + Q + +++ M + +C CG+RW
Sbjct: 80 RTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>BC017112-1|AAH17112.1| 125|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide I, 14.5kDa protein.
Length = 125
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--ECGNRW 188
+TE C KC K + Q + +++ M + +C CG+RW
Sbjct: 80 RTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>AD001527-2|AAB51181.1| 125|Homo sapiens HUMAN DNA-DIRECTED RNA
POLYMERASE II 14.5 KD SUBUNIT protein.
Length = 125
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCN--ECGNRW 188
+TE C KC K + Q + +++ M + +C CG+RW
Sbjct: 80 RTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123
>D70831-1|BAA24050.1| 395|Homo sapiens Zinc-finger protein protein.
Length = 395
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 51 VQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
++ TK + KC KC K + L S F C ECG + + +K R
Sbjct: 15 IRHTKKKPFKCTKCGKSFGMISCLTEHSRIHTRVNFYKCEECGKAFNWSSTLTKHKR 71
>BC047243-1|AAH47243.1| 783|Homo sapiens zinc finger protein 107
protein.
Length = 783
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +3
Query: 60 TKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
T + KC +C K C +QL C ECG + + +K R
Sbjct: 99 TGNKHFKCKECSKSFCVLSQLTQHRRIHTRVNSYKCEECGKAFNWFSTLTKHKR 152
>AB027251-1|BAA85623.1| 783|Homo sapiens zinc finger protein
(ZFD25) protein.
Length = 783
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +3
Query: 60 TKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
T + KC +C K C +QL C ECG + + +K R
Sbjct: 99 TGNKHFKCKECSKSFCVLSQLTQHRRIHTRVNSYKCEECGKAFNWFSTLTKHKR 152
>BC063818-1|AAH63818.1| 504|Homo sapiens ZNF273 protein protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 6 EKFIK--EAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
+K++K ++ + + T + KC +C K C +QL F C CG
Sbjct: 116 DKYVKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNFYKCKTCG 175
>AY438646-1|AAR14184.1| 475|Homo sapiens zinc finger protein 383
protein.
Length = 475
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 69 EMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
E L+CGK +N Q Q +DE CNECG + C + ++ R
Sbjct: 395 ECLECGKAFTQNSQLFQHQRIHTDEKPYE---CNECGKAFNKCSNLTRHLR 442
>AK093182-1|BAC04086.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ35863 fis, clone TESTI2007524, moderately
similar to HYPOTHETICAL ZINC FINGER PROTEIN. ).
Length = 475
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 69 EMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
E L+CGK +N Q Q +DE CNECG + C + ++ R
Sbjct: 395 ECLECGKAFTQNSQLFQHQRIHTDEKPYE---CNECGKAFNKCSNLTRHLR 442
>AL159168-4|CAH73468.1| 744|Homo sapiens zinc finger protein 483
protein.
Length = 744
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 45 ATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
+T+ KT M C KC+K +C L +E C++CG + + +K R
Sbjct: 403 STLSRRKTPM--CEKCRKDSCQEAALNKDEGNESGEKTHKCSKCGKAFGYSASLTKHRR 459
>AB075842-1|BAB85548.1| 746|Homo sapiens KIAA1962 protein protein.
Length = 746
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 45 ATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC*DCSKQSR 221
+T+ KT M C KC+K +C L +E C++CG + + +K R
Sbjct: 405 STLSRRKTPM--CEKCRKDSCQEAALNKDEGNESGKKTHKCSKCGKAFGYSASLTKHRR 461
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,207,512
Number of Sequences: 237096
Number of extensions: 927099
Number of successful extensions: 2706
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2703
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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