Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30f09
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 113 5e-26
AC024214-2|AAF36076.1| 108|Caenorhabditis elegans Hypothetical ... 42 1e-04
Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical pr... 37 0.005
AC024880-8|AAK85514.1| 167|Caenorhabditis elegans Hypothetical ... 36 0.011
Z70211-2|CAA94158.2| 272|Caenorhabditis elegans Hypothetical pr... 28 3.0
AC090999-22|AAK26159.1| 481|Caenorhabditis elegans Hypothetical... 28 3.0
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z66562-3|CAD44123.1| 485|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z66562-1|CAA91464.1| 519|Caenorhabditis elegans Hypothetical pr... 27 3.9
U23179-5|AAK68210.2| 347|Caenorhabditis elegans Serpentine rece... 27 3.9
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 27 3.9
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 27 5.2
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 27 5.2
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF098996-7|AAC68708.2| 382|Caenorhabditis elegans Serpentine re... 27 5.2
AC006638-8|AAK85487.2| 644|Caenorhabditis elegans Hypothetical ... 27 5.2
AF016654-3|AAB66030.1| 348|Caenorhabditis elegans Hypothetical ... 27 6.9
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 26 9.1
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 26 9.1
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 26 9.1
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 26 9.1
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 26 9.1
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 113 bits (272), Expect = 5e-26
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +3
Query: 3 REKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGN 182
R+KF KEAI + Q++ QGT ++M KCGKC KKNCTY QLQTRSSDEPMTTFV C ECGN
Sbjct: 244 RDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGN 303
Query: 183 RWKFC 197
RWKFC
Sbjct: 304 RWKFC 308
>AC024214-2|AAF36076.1| 108|Caenorhabditis elegans Hypothetical
protein Y77E11A.6 protein.
Length = 108
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRWK 191
C C + QLQTRS+DEP T F C N C +RWK
Sbjct: 69 CPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRWK 107
>Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical
protein C15H11.8 protein.
Length = 119
Score = 37.1 bits (82), Expect = 0.005
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 81 CGKCKKKNCTYNQLQTRSSDEPMTTFVLCNEC 176
C KC +Y+ +QTRS+DE T F C +C
Sbjct: 80 CTKCGHSKASYSTMQTRSADEGQTVFYTCLKC 111
>AC024880-8|AAK85514.1| 167|Caenorhabditis elegans Hypothetical
protein Y97E10AR.5 protein.
Length = 167
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLC--NECGNRW 188
KTE +C C K + Q QT+ ++E M + +C +C +RW
Sbjct: 122 KTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRW 165
>Z70211-2|CAA94158.2| 272|Caenorhabditis elegans Hypothetical
protein K11E4.2 protein.
Length = 272
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -1
Query: 395 LKADYFIKF*TKKSPYLHTIVVNDSNNAFIFARNQIIVNVIKHMILK 255
++ ++ + + T P+ +IV N NN F R Q+ +V+KH +++
Sbjct: 225 MRGEFAVSYKTSHGPHDKSIVPN--NNIDFFRRFQVDQSVLKHPVVR 269
>AC090999-22|AAK26159.1| 481|Caenorhabditis elegans Hypothetical
protein Y82E9BR.17a protein.
Length = 481
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +1
Query: 151 PHLSFVMNVVIAGNFAKT---------ALNNLERWFKYLL**YIFSIMCFITFTMIWF 297
PHL+ + ++ GNF KT LN +ER+ + Y+ I+C++ + WF
Sbjct: 110 PHLADIKQIL--GNFWKTYSEPRIAEEVLNTIERFCVITMGRYVRKILCYMNVKLDWF 165
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 66 TEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECG 179
T ML CG C KK T + ++ S E + C +CG
Sbjct: 491 TAMLTCGVCTKKFNTLSSIRRHMSME--YSIFRCQQCG 526
>Z66562-3|CAD44123.1| 485|Caenorhabditis elegans Hypothetical
protein F42E11.2c protein.
Length = 485
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 253 IFSIMCFITFTMIWFLANINALLLSLTTIVCR*GD 357
+FS + F F ++W L +I+ L CR GD
Sbjct: 248 VFSAIGFFIFVVVWLLISISLPLTIALADFCRDGD 282
>Z66562-1|CAA91464.1| 519|Caenorhabditis elegans Hypothetical
protein F42E11.2a protein.
Length = 519
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 253 IFSIMCFITFTMIWFLANINALLLSLTTIVCR*GD 357
+FS + F F ++W L +I+ L CR GD
Sbjct: 248 VFSAIGFFIFVVVWLLISISLPLTIALADFCRDGD 282
>U23179-5|AAK68210.2| 347|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 2 protein.
Length = 347
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 141 HRNFLFVVDCRYSSSFCICHILTFLF 64
H N F++ C +S+SF +L FLF
Sbjct: 57 HGNIKFLLVCYFSASFVFAVLLAFLF 82
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Frame = -1
Query: 317 NAFIFARNQIIVNV------IKHMILKMYHYSKYLNHLSRLF 210
N F+F Q+ +N+ I+ I + YH++K+L H+ +F
Sbjct: 310 NTFLFHGFQLTLNLNQLNVEIRQFINRRYHHTKWLEHIFEVF 351
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+ T ++KC C KK + L+ S+ M C+ CG R+K
Sbjct: 72 RSTHDGLMKCQYCPKKVNSEAALERHMSECRMIRPHECDRCGKRFK 117
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+ T ++KC C KK + L+ S+ M C+ CG R+K
Sbjct: 138 RSTHDGLMKCQYCPKKVNSEAALERHMSECRMIRPHECDRCGKRFK 183
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+ T ++KC C KK + L+ S+ M C+ CG R+K
Sbjct: 72 RSTHDGLMKCQYCPKKVNSEAALERHMSECRMIRPHECDRCGKRFK 117
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 191
+ T ++KC C KK + L+ S+ M C+ CG R+K
Sbjct: 138 RSTHDGLMKCQYCPKKVNSEAALERHMSECRMIRPHECDRCGKRFK 183
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 69 EMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNE 173
E+ C KCKK NC + + DE T + NE
Sbjct: 704 EVKYCEKCKKANCPSRNRRFTTFDESEDTTLTGNE 738
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 69 EMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNE 173
E+ C KCKK NC + + DE T + NE
Sbjct: 704 EVKYCEKCKKANCPSRNRRFTTFDESEDTTLTGNE 738
>AF098996-7|AAC68708.2| 382|Caenorhabditis elegans Serpentine
receptor, class w protein60 protein.
Length = 382
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 296 NQIIVNVIKHMILKMYHYSKYLNHLSRLF-RAVLAKF 189
N +IVNVI H + M S+Y + ++LF R V+ ++
Sbjct: 320 NLVIVNVIAHCFISMQMSSQYRDIATQLFLRKVIRRW 356
>AC006638-8|AAK85487.2| 644|Caenorhabditis elegans Hypothetical
protein F41G4.7 protein.
Length = 644
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = +3
Query: 54 QGTKTEMLKCGKCKK----KNCTY--NQLQTRSSDEPMTTFVLCNECG 179
QG+ +LKC CK+ +NCT N L R E + + C E G
Sbjct: 509 QGSLEPVLKCPLCKRHHAPENCTIIRNGLDRREEAEKIKMCIQCLEVG 556
>AF016654-3|AAB66030.1| 348|Caenorhabditis elegans Hypothetical
protein C17A2.4 protein.
Length = 348
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 220 LDCLEQS*QNFQRLPHSLQRTNV 152
LD L+ S Q+F LP S QRT+V
Sbjct: 146 LDFLDDSSQDFGNLPRSNQRTHV 168
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 93 KKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
KK+ ++ +DE F + N C RW+FC
Sbjct: 545 KKRESRKIGTNSKHNDEEDECFEVINNCLMRWEFC 579
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 93 KKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
KK+ ++ +DE F + N C RW+FC
Sbjct: 593 KKRESRKIGTNSKHNDEEDECFEVINNCLMRWEFC 627
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 93 KKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
KK+ ++ +DE F + N C RW+FC
Sbjct: 749 KKRESRKIGTNSKHNDEEDECFEVINNCLMRWEFC 783
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 93 KKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
KK+ ++ +DE F + N C RW+FC
Sbjct: 749 KKRESRKIGTNSKHNDEEDECFEVINNCLMRWEFC 783
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 93 KKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 197
KK+ ++ +DE F + N C RW+FC
Sbjct: 594 KKRESRKIGTNSKHNDEEDECFEVINNCLMRWEFC 628
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,727,291
Number of Sequences: 27780
Number of extensions: 165993
Number of successful extensions: 523
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -