Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f07
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5658E Cluster: PREDICTED: similar to Zinc finge...    33   7.2  
UniRef50_Q7UF05 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_UPI0000D5658E Cluster: PREDICTED: similar to Zinc finger
           Y-chromosomal protein 2; n=3; Tribolium castaneum|Rep:
           PREDICTED: similar to Zinc finger Y-chromosomal protein
           2 - Tribolium castaneum
          Length = 433

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -3

Query: 194 CPNYLTTEG--KQHILY-HNLMKQIVQSDCVQCAFRTKI 87
           CP   T +G  K HIL  H    +I  S C QCAF+TK+
Sbjct: 96  CPFKATQKGSLKSHILRKHTPSDEIQWSQCTQCAFKTKL 134


>UniRef50_Q7UF05 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 330

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 213 MNLPPPSLQPNMEKQNTKIRRRKIKSNHQMKIKPL*GKGRS 335
           M   P  L   ++ + + IR  K+ SNH++KI  + G GRS
Sbjct: 1   MRFTPSRLTHGLKSKTSLIREEKVVSNHRLKIVYIVGSGRS 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,458,790
Number of Sequences: 1657284
Number of extensions: 12802151
Number of successful extensions: 31831
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31789
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)