Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30f07
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.6  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   9.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 537  RSTEHHLVQKVLFLIYFALE-EKAMLKRHQNNNNQKRPKTKRSQK 668
            RST++H  Q+ L L   A E +   L R Q    Q++ + ++ Q+
Sbjct: 1271 RSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQ 1315


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 296 PNENQTIVGERKKFLVTTLSTSDEKVPSSS-VAESNVHTVHFGTRGVESQRPHVRSIFK 469
           PN N   VG   K +V     S ++VP+S+ V        +     ++++R H + + K
Sbjct: 141 PNTNSCTVGVHFKQIVDREDGSFDEVPNSAFVVARTAFRDNSSYYTIDNKRVHFKEVSK 199


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 283 SSRTTK*KSNHCRGKEEVSC 342
           S RT + +SN C   EEV C
Sbjct: 100 SVRTFRLRSNRCPAYEEVCC 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,121
Number of Sequences: 2352
Number of extensions: 14555
Number of successful extensions: 58
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)