Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e18
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-8|CAB05549.1|  340|Caenorhabditis elegans Hypothetical pr...   185   3e-47
Z81042-6|CAB02797.1|  340|Caenorhabditis elegans Hypothetical pr...   185   3e-47
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    33   0.31 
L16621-8|AAA28228.1|  632|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z83113-8|CAB05549.1|  340|Caenorhabditis elegans Hypothetical
           protein C27H6.8 protein.
          Length = 340

 Score =  185 bits (451), Expect = 3e-47
 Identities = 86/164 (52%), Positives = 111/164 (67%)
 Frame = +2

Query: 287 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRYD 466
           IGTH G FHCDE  ACFMLK LPQ+KD  I+RTRD  +L  CDI+VDVG +FDH K+RYD
Sbjct: 5   IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYD 64

Query: 467 HHQAGFNETLSTLRPELGGSYKIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYK 646
           HHQ GF +T+ TL      ++  KLSSAGLVYA+YG ++I Q+   + S +  D  L Y 
Sbjct: 65  HHQRGFTDTMRTLEKL---NFDTKLSSAGLVYAHYGREVINQILGGNVSSSMID--LFYH 119

Query: 647 KVYESFIQEIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWN 778
           ++YE F++ IDAIDNGI   +  P+Y    +LS+R  + N  WN
Sbjct: 120 RLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQFNSHWN 163


>Z81042-6|CAB02797.1|  340|Caenorhabditis elegans Hypothetical
           protein C27H6.8 protein.
          Length = 340

 Score =  185 bits (451), Expect = 3e-47
 Identities = 86/164 (52%), Positives = 111/164 (67%)
 Frame = +2

Query: 287 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRYD 466
           IGTH G FHCDE  ACFMLK LPQ+KD  I+RTRD  +L  CDI+VDVG +FDH K+RYD
Sbjct: 5   IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYD 64

Query: 467 HHQAGFNETLSTLRPELGGSYKIKLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYK 646
           HHQ GF +T+ TL      ++  KLSSAGLVYA+YG ++I Q+   + S +  D  L Y 
Sbjct: 65  HHQRGFTDTMRTLEKL---NFDTKLSSAGLVYAHYGREVINQILGGNVSSSMID--LFYH 119

Query: 647 KVYESFIQEIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLNPEWN 778
           ++YE F++ IDAIDNGI   +  P+Y    +LS+R  + N  WN
Sbjct: 120 RLYEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQFNSHWN 163


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
            protein W09B6.1a protein.
          Length = 2054

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 350  LPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKR 460
            L +  DAEI++ R  N LN+C +V  + +++  EK R
Sbjct: 1396 LTEISDAEILKKRSANALNNCGMVAWIMTLYTPEKPR 1432


>L16621-8|AAA28228.1|  632|Caenorhabditis elegans Hypothetical
           protein ZK688.2 protein.
          Length = 632

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
 Frame = +2

Query: 344 KNLPQYKD-AEIIRTRDLN-----KLNDCDIVVDVGSVFDHEKKRYDHHQAGFNETLSTL 505
           +N+ +Y + A+++  RD++     +    D VV  G +  HEK R+D  Q  +++     
Sbjct: 126 RNIVRYCELAQVLVFRDISMRTRRRFPTLDTVVAAGFMMPHEKDRFDEIQYKYSKYWVPF 185

Query: 506 RPELGGSYKIKLSSAGLVYAYYGEDIIQ-QLKEESTSL 616
           +     +Y+ +    GL+ + Y + ++Q ++K+  T L
Sbjct: 186 QWAFSLTYEAR--KKGLIESDYYQVVVQDEIKKFRTGL 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,377,435
Number of Sequences: 27780
Number of extensions: 331236
Number of successful extensions: 857
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)