Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e16
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.6  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 259 GFYSFMIMC-CLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIK 435
           G+Y  + M  CL S+ ++            C  N + + +   SRN + +   Y DL + 
Sbjct: 210 GYYHILAMLNCLCSLWFINCTAKGRVAVWMC--NNLHKALE--SRNPAKILGAYRDLWVD 265

Query: 436 LSKFSQELPK 465
           LS   Q+L K
Sbjct: 266 LSHMMQQLGK 275


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 259 GFYSFMIMC-CLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIK 435
           G+Y  + M  CL S+ ++            C  N + + +   SRN + +   Y DL + 
Sbjct: 210 GYYHILAMLNCLCSLWFINCTAKGRVAVWMC--NNLHKALE--SRNPAKILGAYRDLWVD 265

Query: 436 LSKFSQELPK 465
           LS   Q+L K
Sbjct: 266 LSHMMQQLGK 275


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1

Query: 451 QELPKLEGQMEILEAL 498
           +E PK+EG++++ EAL
Sbjct: 40  KEQPKIEGKVQVPEAL 55


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 193 SQNNSTADQYNTRTTKPWSFLSGFYSFMI 279
           S++ S     N  T KP+ F   FY+ +I
Sbjct: 18  SKHYSYWQSKNVPTDKPFLFFGSFYNLVI 46


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 580  NAFEFSLHSEVKENSDSIQNPLFPQCSP 497
            NA E+S H E     DS+ + L     P
Sbjct: 1370 NAGEYSCHVENDYGQDSVTHQLIVNAPP 1397


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 636 WLENILFGHFTKIS*IKYRM 577
           +L N+LF  F +I  + YRM
Sbjct: 250 FLTNLLFWEFDQIVNVAYRM 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,405
Number of Sequences: 336
Number of extensions: 2950
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)