Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e16
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.0  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   3.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.7  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    24   4.7  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   6.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.2  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/48 (20%), Positives = 26/48 (54%)
 Frame = +1

Query: 352  LNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEA 495
            +NG+ + I+ +S N+S +    +  E  + K   ++  +E ++E  ++
Sbjct: 902  INGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQS 949


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 349  DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQME 483
            +L  I ++I +I   +  MK+  + + ++    S E+P L+G M+
Sbjct: 914  ELAAIHQSIANIESRIESMKSKRQTILMQAKMESIEIPLLQGSMD 958


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 150 NNGPCSAKS*GPLSIPEQLYSRSI*HTNY 236
           NNG C+  S GP  +  QL  R     NY
Sbjct: 217 NNGACNGDSGGPAILNNQLVGRPNFIINY 245


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +1

Query: 361 ITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQ----MEILEALANTVETK 519
           I  +I ++    + ++    DL+ +LSK+ Q   K++ Q     E+   L N  E K
Sbjct: 638 IENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEK 694


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 244 WSFLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITR 369
           W   +G YSF     L+S  Y++   HC+  +    L  I R
Sbjct: 152 WRQPNGGYSFDCGGSLISEYYVLTAAHCYAESADGTLPSIVR 193


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 520 DFGWNPNSPLLLNAERIQTHSVFDSGNFSK 609
           +F ++ N P +    R    +V   GNFSK
Sbjct: 354 EFEFHANRPFMFLIRRTMDGNVLQVGNFSK 383


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 307 LMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQEL 459
           L L+ + + CN +  L  I R  +++      +K+ +ED  I+     Q L
Sbjct: 544 LPLDKNLNDCNRQSILGRIIRVTDEVIEYRKWIKDTFEDKLIRQPSLQQPL 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,212
Number of Sequences: 2352
Number of extensions: 12985
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)