Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e13
         (169 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   2.7  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    19   3.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    19   3.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    19   3.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 168 PDMTLKNPGSDDMVWRLR 115
           PD+ + +PG  D  +R R
Sbjct: 215 PDLDMNHPGFADKEYRAR 232


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 83  SXCIFFCSGFI*KIII 36
           S C  FC GFI K +I
Sbjct: 524 SICKNFCFGFITKQLI 539


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
          5-like protein protein.
          Length = 162

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 59 GFI*KIIICP 30
          GFI K ++CP
Sbjct: 5  GFIRKFVLCP 14


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 129 PCRHCQDFS 155
           PC+ C DFS
Sbjct: 37  PCKVCGDFS 45


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 129 PCRHCQDFS 155
           PC+ C DFS
Sbjct: 37  PCKVCGDFS 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,614
Number of Sequences: 336
Number of extensions: 271
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 35
effective length of database: 110,825
effective search space used:  2216500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)