Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e12
         (121 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7LTP4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q64LI7 Cluster: ATP synthase A chain; n=1; Microstomum ...    30   8.8  

>UniRef50_A7LTP4 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 305

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -1

Query: 121 FFFYLLKIYLCSSQKYMFIIYIILHTMTL-PKHLKTSFFY 5
           FF YL+K YL  +  Y+F+  ++L+ +   PK  K+++FY
Sbjct: 17  FFIYLIK-YLGITAAYIFLSLVVLYFVPFAPKATKSTWFY 55


>UniRef50_Q64LI7 Cluster: ATP synthase A chain; n=1; Microstomum
           lineare|Rep: ATP synthase A chain - Microstomum lineare
          Length = 195

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 118 FFYLLKIYLCSSQKYMFIIYIILHT 44
           FFY  +I++C+ Q Y+F+  + ++T
Sbjct: 166 FFYFFEIFVCAIQAYIFVTLVCVYT 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,127,177
Number of Sequences: 1657284
Number of extensions: 1055968
Number of successful extensions: 3730
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3729
length of database: 575,637,011
effective HSP length: 20
effective length of database: 542,491,331
effective search space used: 10307335289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)