Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e12
         (121 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0105 + 31675083-31675313,31676171-31676815                       26   4.9  
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164...    25   6.5  

>03_06_0105 + 31675083-31675313,31676171-31676815
          Length = 291

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 104 KNLFVFVTKIYVHNLH-NITYNDITKTFK 21
           KN F+F  K++V  LH  +T  D+   F+
Sbjct: 105 KNQFIFQKKVFVGGLHETVTVKDLISYFE 133


>01_07_0303 +
           42615578-42615709,42616273-42616312,42616393-42616477,
           42616634-42616813,42618274-42618354,42618890-42619011,
           42619867-42620723,42621656-42621897,42622107-42622200,
           42622306-42622476,42622695-42622740,42624101-42624111,
           42624141-42624392
          Length = 770

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 112 YLLKIYLCSSQKYMFIIYIILHTMTLP 32
           ++LK+ L S  KYM  +Y + H M +P
Sbjct: 417 HVLKMSLDSCDKYMIGVYDLKHDMFVP 443


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,269,143
Number of Sequences: 37544
Number of extensions: 20537
Number of successful extensions: 73
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 14,793,348
effective HSP length: 20
effective length of database: 14,042,468
effective search space used: 266806892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)