Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e10
         (477 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23C22 Cluster: Myb-like DNA-binding domain containing ...    36   0.61 
UniRef50_Q6KHX4 Cluster: Expressed protein; n=1; Mycoplasma mobi...    33   2.5  
UniRef50_Q21716 Cluster: Putative uncharacterized protein srd-39...    32   7.5  
UniRef50_Q15EY3 Cluster: Putative uncharacterized protein; n=1; ...    32   7.5  
UniRef50_Q8IAX7 Cluster: Putative uncharacterized protein MAL8P1...    31   10.0 
UniRef50_Q5D8F8 Cluster: SJCHGC09023 protein; n=1; Schistosoma j...    31   10.0 

>UniRef50_Q23C22 Cluster: Myb-like DNA-binding domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Myb-like DNA-binding domain containing protein -
           Tetrahymena thermophila SB210
          Length = 836

 Score = 35.5 bits (78), Expect = 0.61
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -3

Query: 286 NNTLL*SLQWIQLNVFSQNFHIFIFYEQFLDNQGHLNNLR 167
           N+TL  SL  + LN F +NF+  ++   F+DNQ + NN +
Sbjct: 540 NSTLFESLNALTLNNFDKNFNSALYDGNFMDNQNYHNNFQ 579


>UniRef50_Q6KHX4 Cluster: Expressed protein; n=1; Mycoplasma
           mobile|Rep: Expressed protein - Mycoplasma mobile
          Length = 1461

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = -2

Query: 362 LISFNINIKTI*LMVSAFYYNIQVK*QYAVIELTMDTT--ECFLSKLSHFHI 213
           +I  N+NI +I   +  FY NI+ K Q   +EL   +T  E +L+KL +F++
Sbjct: 94  IILNNLNINSIEFQIKGFYKNIEFKTQEFNLELNSISTIIENYLNKLKNFNL 145


>UniRef50_Q21716 Cluster: Putative uncharacterized protein srd-39;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein srd-39 - Caenorhabditis elegans
          Length = 336

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 475 FFXIFKPFFIHTSIIICTQWLVFVFIEK*NLSMF 374
           F  +F P F  TS+I+ T WL+F+      + +F
Sbjct: 10  FLSLFNPVFFCTSVILQTIWLLFIIFHSAKMGIF 43


>UniRef50_Q15EY3 Cluster: Putative uncharacterized protein; n=1;
           Nosema bombycis|Rep: Putative uncharacterized protein -
           Nosema bombycis
          Length = 376

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 372 KNIDKFYFSINTKTNHCVQIIIEV*IKNGLNIXK 473
           KN++KFYF +N    HC    IE+ +KN  N+ K
Sbjct: 268 KNMNKFYFEVNATYKHCKIKRIEI-LKNISNLKK 300


>UniRef50_Q8IAX7 Cluster: Putative uncharacterized protein
           MAL8P1.93; n=2; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.93 - Plasmodium falciparum (isolate 3D7)
          Length = 234

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -2

Query: 473 FXNI*TIFYSHLYNYLYTVVSFCIYRKVKLIDVFAYLLISF 351
           F NI  I Y ++Y Y+Y  +  CI   + ++D+F ++L+ F
Sbjct: 196 FVNI-DIIYIYIYIYIYIYIYICI---IYILDIFFFILLKF 232


>UniRef50_Q5D8F8 Cluster: SJCHGC09023 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09023 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 133

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 22/67 (32%), Positives = 37/67 (55%)
 Frame = +3

Query: 117 LCSPIYFCRQITNSKIILRLLRCPWLSKNCS*NMKM*KF*EKTFSCIHCKLYNSVLLFHL 296
           LC+ ++ CRQ+TN  I+L+ ++ P L      NMK  K        +   LY SVL++ +
Sbjct: 70  LCACLHRCRQLTN--IVLQFIQSPELHVIHLVNMK--KICLAKSPNVLIVLYLSVLVYRM 125

Query: 297 NIVIKST 317
           N+++  T
Sbjct: 126 NMLLHGT 132


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,108,123
Number of Sequences: 1657284
Number of extensions: 8095269
Number of successful extensions: 17558
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17555
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)