Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e09
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.3  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   2.3  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   4.0  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +2

Query: 167 VKQVRNKK-LLPDLRKEGELTKEIILSTKEKHGVPVTSRLFSHHTLASVRKLSFYFPYNL 343
           +KQVR++K LLP +  +  +  +  +   E+  +      F  H     + +  Y  Y L
Sbjct: 151 IKQVRSQKPLLPMILDQHYINLKSQVIKAERRVLKELG--FCVHVKHPHKLIVMYLKY-L 207

Query: 344 PDDSLDFILTSKYNHSTEQFADKVDVFLQPETIGC 448
             +    ++   +N   + F   V V  QPETI C
Sbjct: 208 ELEKHQNMMQMAWNFMNDSFRTDVFVRYQPETIAC 242


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 574 IHQLYAEGRPTLVNTASSQRMAHW 503
           IHQLY++    L  T   +R  HW
Sbjct: 140 IHQLYSDMLKDLARTEFDRRPPHW 163


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 173 QVRNKKLLPDLRKEGELTKEIILSTKEKHGVPVTSRLFSHHTL 301
           QV+ + ++    K G    EII   +E  GV +  R ++H  L
Sbjct: 17  QVQLRSVIITRSKAGATVDEIIDDYRELTGVHLLDRFYTHSAL 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,872
Number of Sequences: 2352
Number of extensions: 14931
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)