Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e08
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 646 GGFTFVLMFRTPTTMFYL*FFLCIHF 569
           G FT  L+F  P  +F + F LC ++
Sbjct: 77  GYFTVHLLFYCPFIIFTVHFLLCTYY 102


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 59  RGVHCT*CVPIFNYENKQKC 118
           RG+H    VP + Y+N+ +C
Sbjct: 573 RGIHAEALVPRWCYQNEGEC 592


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 680 NSLFEFLFSTYRGLHIRTHVSYTNNYVLFIIFSLYSFL 567
           NSL+E  F T+R       +  ++N +  I   L+ FL
Sbjct: 282 NSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFL 319


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 118 TFLFVFVVKYRYALRTMDTSVVFF*QIL 35
           T   +F   Y+Y  +T    +VF   IL
Sbjct: 159 TVTIIFFASYQYGTKTYSLFIVFMTVIL 186


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 118 TFLFVFVVKYRYALRTMDTSVVFF*QIL 35
           T   +F   Y+Y  +T    +VF   IL
Sbjct: 159 TVTIIFFASYQYGTKTYSLFIVFMTVIL 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,854
Number of Sequences: 336
Number of extensions: 4472
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)