Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30e07
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    27   0.73 
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    27   0.73 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.2  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    25   2.2  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   3.0  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             24   5.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.0  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 389 MILSKFPLEIEVWNDDENEVEIFVGIGTMHWDTMFFHMLKDTAEA 523
           +I  + P + E W +   +VE  +  G  HW +  FH    TA +
Sbjct: 51  LIPDEAPQQPEKWEEVMADVERVIMPGVTHWHSPKFHAYFPTANS 95


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 389 MILSKFPLEIEVWNDDENEVEIFVGIGTMHWDTMFFHMLKDTAEA 523
           +I  + P + E W +   +VE  +  G  HW +  FH    TA +
Sbjct: 82  LIPDEAPQQPEKWEEVMADVERVIMPGVTHWHSPKFHAYFPTANS 126


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 555 CLIDNGSWSLQASAVSLSIWKN 490
           C++  GSW+     VSL+++ N
Sbjct: 165 CIMKFGSWTFNGDQVSLALYNN 186


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = -1

Query: 328 PFPPSIFVTLHDVVRCLFIHCQLTFLDDELHFRTEFYFDNQILVCSALFVLVRRKNCHFV 149
           P   S  +  +   R  F + QLT L+ E HF        +I + +AL +   +    F 
Sbjct: 43  PHQSSFMINNNSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANALHLNETQVKIWFQ 102

Query: 148 NEYLYQ 131
           N  + Q
Sbjct: 103 NRRMKQ 108


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/35 (28%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 533 HEPLSIKQCTPLFAECCCRQVGEISFILR-LSALG 634
           H P+ + +   L A   C QV ++ F+++ ++A+G
Sbjct: 52  HNPVEVLEAVRLCAVEACHQVEKLGFLVKDIAAIG 86


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -3

Query: 389 SEQYRDMKGTDKIFQPLLFVTISSVHFRHTPRCR--PLSF 276
           SEQ   + GTD    P      S++H      CR  PLSF
Sbjct: 167 SEQCNRLNGTDGSIFPPRITKNSTLHVYEKDLCRLLPLSF 206


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 283  NGRHRGV*RKWTEEMVTNNKGWKILSVPFISRYC-SDDPQQVSFRD 417
            NG+ + +  K+  EM TN+ G      P I  Y    +  ++SFRD
Sbjct: 1765 NGKPQQIHEKYAVEMYTNDDGG---DQPLIRVYALPGNELEISFRD 1807


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,223
Number of Sequences: 2352
Number of extensions: 14909
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)